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Citing CMDGA
Clear Filters
Annotation type
33
chromatin state
2
eQTL
2
gene expression
1
histone modifications
1
target gene predictions
Annotation Category
2
Genetic variant effects
1
Target gene links
Annotation type Category
DNase-seq
33
ChIP-seq
4
ATAC-seq
4
H3K27ac ChIP-Seq
2
RNA-seq
1
pCHi-C
Available data
1
bed bed3+
File set status
3
released
Genome assembly (visualization)
2
GRCh38
1
hg19
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
51
HeLa-S3
37
H1-hESC
19
HFFc6
16
K562
14
islet of Langerhans
10
macrophage
9
liver
9
pericyte cell
8
endothelial cell
7
smooth muscle cell
6
GM12878
6
H9
6
fibroblast
6
iPSC derived cell line
6
lymphoblastoid cell line
6
lymphocyte
6
monocyte
6
olfactory receptor cell
6
subcutaneous adipose tissue
5
adipose tissue
4
CyT49
4
HUES8
4
naive thymus-derived CD4-positive, alpha-beta T cell
4
pancreatic delta cell
3
CD4-positive, alpha-beta T cell
3
CD8-positive, alpha-beta T cell
3
activated CD4-positive, alpha-beta T cell
3
blood cell
3
cardiomyocytes (cardiac muscle cell)
3
colon epithelial cell
3
heart left ventricle
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
neutrophil
3
pancreas
3
pancreatic alpha cell
3
pancreatic beta cell
3
psoas muscle
3
putamen
3
regulatory T cell
3
skin of body
3
substantia nigra
2
Ammon's horn
2
HCT116
2
T cell
2
activated CD8-positive, alpha-beta T cell
2
adrenal gland
2
amygdala
2
anterior cingulate cortex
2
aorta
2
articular chondrocyte
2
astrocyte
2
blood
2
blood vessel smooth muscle cell
2
brain
2
cartilage tissue
2
caudate nucleus
2
cerebellum
2
coronary artery
2
cortical cell of adrenal gland
2
dorsolateral prefrontal cortex
2
enteric smooth muscle cell
2
esophagus
2
fat cell
2
frontal cortex
2
gabaergic neuron
2
glutamatergic neuron
2
heart right ventricle
2
hypothalamus
2
keratinocyte
2
luminal epithelial cell of mammary gland
2
lung
2
lymphocyte of B lineage (iPSC)
2
megakaryocyte
2
memory B cell
2
mesenchymal stem cell
2
microglial cell
2
muscle
2
naive B cell
2
natural killer cell
2
nucleus accumbens
2
omental fat pad
2
ovary
2
pancreatic A cell
2
pancreatic acinar cell
2
pancreatic ductal cell
2
right atrium auricular region
2
skeletal muscle tissue
2
small intestine
2
smooth muscle cell of the esophagus
2
spleen
2
thymus
2
tibial artery
2
tibial nerve
2
type B pancreatic cell
2
type I muscle cell
2
type II muscle cell
2
type II pneumocyte
1
B cell
1
B-lymphoblastoid cell line
1
C1 segment of cervical spinal cord
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
EndoC_BH1
1
GM18486
1
GM18505
1
GM18507
1
GM18508
1
GM18516
1
GM18522
1
GM19099
1
GM19141
1
GM19193
1
GM19204
1
GM19238
1
GM19239
1
GM19240
1
HepG2
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
Leydig cell
1
T follicular helper cell
1
T-helper 1 cell
1
T-helper 17 cell
1
T-helper 2 cell
1
abdominal aorta artery
1
adult endothelial progenitor cell
1
alternatively activated macrophage
1
alveolar macrophage
1
ascending aorta
1
basal cell
1
basal cell of epidermis
1
bladder (urinary bladder)
1
body of pancreas
1
breast
1
cardiac endothelial cell
1
cardiac precursors (cardiac muscle cell)
1
cell
1
cerebellar hemisphere
1
cerebellum (Hemisphere)
1
ciliated cell
1
club cell
1
colon goblet cell
1
colon sigmoid
1
conventional dendritic cell
1
cortex
1
cortex of kidney
1
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
1
eccrine cell
1
embryonic stem cell
1
endocardial cell
1
endothelial cell of lymphatic vessel
1
endothelial cell of umbilical vein
1
enteric neuron
1
enterochromaffin-like cell
1
enterocyte of epithelium of small intestine
1
erythroblast
1
esophagus mucosa
1
esophagus muscularis mucosa
1
fibroblast cell line
1
fibroblast of cardiac tissue
1
foveolar cell of stomach
1
gastric (mucosa of stomach)
1
gastrocnemius medialis(Muscle - Skeletal)
1
granular cell of epidermis
1
heart
1
helper T cell
1
hepatocyte
1
inflammatory macrophage
1
intestinal tuft cell
1
kidney
1
layer of hippocampus
1
left ventricle myocardium
1
luteal cell
1
mammary gland epithelial cell
1
mast cell
1
mature NK T cell
1
melanocyte
1
mesendoderm
1
mesothelial cell
1
minor salivary gland
1
myoepithelial cell
1
naive B cel
1
naive t cell
1
natural killer cell mediated cytotoxicity
1
nephron tubule
1
neural progenitor cell
1
non keratinizing barrier epithelial cell
1
non-classical monocyte
1
oligodendrocyte
1
oligodendrocyte precursor cell
1
pancreatic polypeptide-secreting cell
1
pancreatic stellate cell
1
paneth cell
1
parietal cell
1
peptic cell
1
pituitary gland
1
placenta
1
plasma cell
1
plasmacytoid dendritic cell
1
progenitor cell
Organ
2
adrenal gland
1
stomach
Date released
2
January, 2022
1
March, 2020
Software used
2
qTLtools
1
nospecificsoft_customcode
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
annotation_type_category!
DNase-seq
Showing 3 of 3 results
table-tab-icon
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Download
FileSet
DSR542EVP
released
Annotation file set
: stomach eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR218JOH
released
Annotation file set
: adrenal gland eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR134TJY
released
Annotation file set
: A target gene prediction annotation in Human Adrenal gland of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP