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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
3
accessible chromatin
3
target gene predictions
2
candidate regulatory elements
1
chromatin state
1
eQTL
1
histone modifications
Annotation Category
3
Target gene links
Annotation type Category
3
DNase-seq
2
ATAC-seq
2
H3K27ac ChIP-Seq
1
ChIP-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
52
HeLa-S3
38
H1-hESC
19
HFFc6
17
K562
16
CD14-positive monocyte
10
pericyte cell
10
pituitary stalk
7
GM12878
7
H9
7
endothelial cell
7
lymphocyte
6
CD4-positive, alpha-beta memory T cell
6
dendritic cell
6
olfactory receptor cell
6
smooth muscle cell
5
CD8-positive, alpha-beta T cell
5
adipocyte
5
keratinocyte
4
B cell
4
CyT49
4
HUES8
4
astrocyte
4
colon epithelial cell
4
common myeloid progenitor, CD34-positive
4
endothelial cell of umbilical vein
4
fibroblast
4
foreskin keratinocyte
4
iPSC derived cell line
4
macrophage
4
psoas muscle
4
thymus
3
CD4-positive, alpha-beta T cell
3
HepG2
3
SK-N-SH
3
T-helper 17 cell
3
adrenal gland
3
epithelial cell of prostate
3
fibroblast of dermis
3
fibroblast of lung
3
foreskin fibroblast
3
hepatocyte
3
monocyte
3
neutrophil
3
pancreatic A cell
3
pancreatic acinar cell
3
pancreatic delta cell
3
pancreatic ductal cell
3
sigmoid colon
3
small intestine
3
spleen
3
stomach
3
type B pancreatic cell
2
22Rv1
2
A673
2
BJAB cell
2
CD4-positive helper T cell
2
CD8-positive, alpha-beta memory T cell
2
GM18507
2
HCT116
2
Jurkat
2
MCF 10A cell
2
NAMALWA cell
2
PC-9
2
Panc1
2
SK-N-DZ
2
T-cell
2
THP-1
2
U937
2
activated CD4-positive, alpha-beta T cell
2
adipose tissue
2
blood vessel smooth muscle cell
2
bronchial epithelial cell
2
cortical cell of adrenal gland
2
dermis lymphatic vessel endothelial cell
2
enteric smooth muscle cell
2
erythroblast
2
fibroblast of cardiac tissue
2
gabaergic neuron
2
glutamatergic neuron
2
heart
2
heart left ventricle
2
heart right ventricle
2
iPS DF 19.11
2
liver
2
luminal epithelial cell of mammary gland
2
lung
2
mammary gland epithelial cell
2
megakaryocyte
2
memory B cell
2
mesenchymal stem cell
2
mesendoderm
2
naive B cell
2
naive thymus-derived CD4-positive, alpha-beta T cell
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
natural killer cell
2
osteoblast
2
ovary
2
pancreas
2
pancreatic alpha cell
2
pancreatic beta cell
2
regulatory T cell
2
skeletal muscle myoblast
2
smooth muscle cell of the esophagus
2
trophoblast cell
2
type II pneumocyte
1
A549
1
Ammon's horn
1
B cell, CD19-positive
1
B-lymphoblastoid cell line
1
BE(2)-C
1
BJ cell
1
CD1c-positive myeloid dendritic cell
1
CD56-positive, CD161-positive immature natural killer cell
1
CMK
1
CWRU1
1
DND-41
1
Daoy
1
EH
1
EL
1
ELR
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
EndoC_BH1
1
G401
1
GM03348
1
GM06990
1
GM08714
1
GM12864
1
GM12865
1
GM12891
1
GM12892
1
GM18486
1
GM18505
1
GM18508
1
GM18516
1
GM18522
1
GM19099
1
GM19141
1
GM19193
1
GM19204
1
GM19238
1
GM19239
1
GM19240
1
H7-hESC
1
HAP-1
1
HCT-116 cell
1
HK-2 cell
1
HT-29
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
IMR-90
1
KARPAS-422 cell
1
KOPT-K1
1
L1-S8
1
L1-S8R
1
LNCAP
1
LoVo cell
1
MCF-7
1
MDA-MB-231 cell
1
MG63
1
MM.1S
1
NCCIT cell
1
NCI-H460 cell
1
NT2-D1 cell
1
OCI-LY7
1
SJCRH30
1
SK-N-MC
1
T cell
1
T-helper 1 cell
1
T-helper 2 cell
1
WERI-Rb-1
1
WI38
1
activated CD8-positive, alpha-beta T cell
1
adult endothelial progenitor cell
1
alternatively activated macrophage
1
alveolar macrophage
1
aorta
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
astrocyte of the spinal cord
1
basal cell
1
basal cell of epidermis
1
beige adipocyte
1
bipolar neuron
1
bladder (urinary bladder)
1
body of pancreas
1
brain microvascular endothelial cell
1
breast epithelium
1
cardiac endothelial cell
1
cardiac muscle cell
1
cardiac precursors (cardiac muscle cell)
1
cardiac ventricle
1
cardiomyocytes (cardiac muscle cell)
1
chorion membrane
1
choroid plexus epithelial cell
1
ciliated cell
1
club cell
1
colon carcinoma
1
colon goblet cell
1
conventional dendritic cell
Organ
3
stomach
Life stage
embryonic
adult
1
child
Date released
2
May, 2021
1
September, 2022
Software used
2
abc
1
r
Lab
2
Jesse Engreitz, Stanford University
1
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
relevant_life_stage!
embryonic
adult
Showing 3 of 3 results
table-tab-icon
matrix-icon
Download
FileSet
DSR337JFE
released
Annotation file set
: Target gene predictions for BSS01654 stomach from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR408DBU
released
Annotation file set
: enhancer-gene predicton of stomach_fetal-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR821UNZ
released
Annotation file set
: enhancer-gene predicton of stomach-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP