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Schema
Citing CMDGA
Clear Filters
Annotation type
2
target gene predictions
1
eQTL
Annotation Category
2
Target gene links
1
Genetic variant effects
Annotation type Category
2
ATAC-seq
2
DNase-seq
2
H3K27ac ChIP-Seq
1
RNA-seq
Available data
2
bed bed3+
File set status
3
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
121
monocyte
34
CD8-positive, alpha-beta T cell
15
CD14-positive monocyte
15
EndoC_BH1
11
embryonic stem cell
10
pituitary stalk
9
macrophage
6
dendritic cell
6
islet of Langerhans
6
lymphoblastoid cell line
6
naive thymus-derived CD4-positive, alpha-beta T cell
6
neutrophil
4
adipocyte
4
regulatory T cell
3
B cell
3
T follicular helper cell
3
T-helper 1 cell
3
T-helper 17 cell
3
T-helper 2 cell
3
adrenal gland
3
blood cell
3
naive B cel
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
skin of body
3
stomach
2
BJAB cell
2
CD4-positive helper T cell
2
Jurkat
2
MCF 10A cell
2
T cell
2
T-cell
2
THP-1
2
U937
2
adipose tissue
2
astrocyte
2
brain
2
central memory CD8-positive, alpha-beta T cell
2
coronary artery
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
endothelial cell
2
fibroblast
2
gamma-delta T cell
2
iPSC derived cell line
2
liver
2
mature natural killer cell
2
memory B cell
2
memory T cell
2
memory regulatory T cell
2
muscle
2
natural killer cell
2
ovary
2
pancreas
2
pancreatic acinar cell
2
pancreatic ductal cell
2
placenta
2
putamen
2
small intestine
2
spinal cord
2
spleen
2
substantia nigra
2
thyroid gland
2
transverse colon
2
trophoblast cell
2
uterus
1
A549
1
A673
1
B cell, CD19-positive
1
CD56-positive, CD161-positive immature natural killer cell
1
GM12878
1
H1-hESC
1
H7-hESC
1
H9
1
HAP-1
1
HCT-116 cell
1
HT-29
1
HeLa-S3
1
HepG2
1
IMR-90
1
K562
1
KARPAS-422 cell
1
LNCAP
1
Leydig cell
1
LoVo cell
1
MCF-7
1
MDA-MB-231 cell
1
MM.1S
1
NCCIT cell
1
OCI-LY7
1
PC-9
1
Panc1
1
SK-N-SH
1
Schwann cell
1
abdominal aorta artery
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
activated pancreatic stellate cell
1
amygdala
1
anterior cingulate cortex
1
beige adipocyte
1
bipolar neuron
1
body of pancreas
1
breast
1
breast epithelium
1
cardiac fibroblast
1
cardiac muscle cell
1
cardiac muscle cell (pacemaker cell)
1
cardiac ventricle
1
cardiomyocytes (cardiac muscle cell)
1
caudate nucleus
1
cell
1
cerebellar hemisphere
1
cerebellum
1
colon sigmoid
1
common myeloid progenitor, CD34-positive
1
cortex
1
cortex of kidney
1
cytotoxic T cell
1
dorsolateral prefrontal cortex
1
endothelial cell of umbilical vein
1
epithelial cell of prostate
1
erythroblast
1
esophagus
1
esophagus mucosa
1
esophagus muscularis mucosa
1
excitatory neuron
1
fat cell
1
fibroblast of arm
1
fibroblast of dermis
1
fibroblast of lung
1
foreskin fibroblast
1
frontal cortex
1
gastrocnemius medialis
1
heart left ventricle
1
helper T cell
1
hematopoietic multipotent progenitor cell
1
hepatocyte
1
hippocampal neuron
1
hypothalamus
1
iPS DF 19.11
1
induced pluripotent stem cell
1
intermediate cardiomyocytes
1
intermediate endothelial cell
1
intermediate smooth muscle cell
1
keratinocyte
1
large intestine
1
layer of hippocampus
1
lower motor neuron
1
lung
1
mammary epithelial cell
1
mast cell
1
megakaryocyte-erythroid progenitor cell
1
mesenchymal stem cell
1
mesendoderm
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
microglial cell
1
minor salivary gland
1
muscle of leg
1
muscle of trunk
1
myeloid dendritic cell
1
myotube
1
naive regulatory T cell
1
neuronal stem cell
1
nucleus accumbens
1
osteoblast
1
pancreatic A cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
pancreatic delta cell
1
pancreatic epsilon cell
1
pancreatic polypeptide-secreting cell
1
pituitary gland
1
prostate gland
1
psoas muscle
1
quiescent pancreatic stellate cell
1
right atrium auricular region
1
sensory neuron
1
sigmoid colon
1
skeletal muscle myoblast
1
smooth muscle cell
1
smooth muscle cell of the coronary artery
1
stem cell
1
subcutaneous adipose tissue
1
testis
1
thymus
1
tibial artery
1
tibial nerve
1
type B pancreatic cell
1
vagina
1
visceral abdominal adipose tissue
1
white adipose tissue
Organ
3
stomach
Date released
57
September, 2022
22
February, 2021
3
June, 2020
2
May, 2021
1
January, 2022
1
March, 2024
Software used
2
abc
1
qTLtools
Lab
2
Jesse Engreitz, Stanford University
1
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
biosample_term_name!
muscle of back
Showing 3 of 3 results
table-tab-icon
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Download
FileSet
DSR542EVP
released
Annotation file set
: stomach eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR408DBU
released
Annotation file set
: enhancer-gene predicton of stomach_fetal-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR821UNZ
released
Annotation file set
: enhancer-gene predicton of stomach-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP