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Schema
Citing CMDGA
Clear Filters
Annotation type
3
accessible chromatin
1
histone modifications
Annotation Category
4
cis-regulatory elements
Annotation type Category
3
DNase-seq
1
ChIP-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
30
neural progenitor cell
21
CD8-positive, alpha-beta T cell
20
breast cancer cell
19
monocyte
17
endothelial cell
17
fibroblast
13
excitatory neuron
13
kidney
13
macrophage
12
neuroblastoma cell
11
embryonic stem cell
11
gastric cancer cell
11
retinal pigment epithelial cell
10
EndoC_BH1
10
Rhabdomyosarcoma
10
diffuse intrinsic pontine glioma
10
pancreatic ductal cell
9
astrocyte
9
keratinocyte
9
liposarcoma
9
pericyte cell
8
T-cell acute lymphoblastic leukemia
8
adipocyte
8
esophageal adenocarcinoma
8
fibroblast cell line
8
hepatocyte
8
neuroblastoma cell line
7
B cell
7
B-lymphoblastoid cell line
7
HepG2
7
acute myeloid leukemia
7
chondrocyte
7
fibroblast of cardiac tissue
7
hESC cell
7
mammary epithelial cell
6
Chondroid Chordoma
6
Rh-4 cell
6
SGBS preadipocytes
6
T cell
6
brain
6
cardiac muscle cell
6
glioblastoma multiforme cancer stem cell
6
heart
6
liver
6
lymphoblastoid cell line
6
melanoma
6
neuronal stem cell
6
osteoblast
6
pancreatic acinar cell
6
smooth muscle cell
5
Ewing sarcoma
5
Jurkat
5
MCF-7
5
RS4-11 cell
5
Th1 cell
5
bronchial epithelial cell
5
dermal fibroblast
5
diffuse large B-cell lymphoma
5
erythroblast
5
esophageal squamous cell carcinoma
5
foreskin fibroblast
5
hepatic stellate cell
5
inhibitory neuron
5
mesenchymal stem cell
5
osteosarcoma
5
pancreatic beta cell
5
prostate cancer cell line
4
B-lymphocyte
4
COLO205
4
HS-SY-2 cell
4
Mantle cell lymphoma
4
Tumor-derived cell line
4
acute myeloid leukemia cell
4
adipose-derived stem cell
4
aortic endothelial cell
4
choroid plexus epithelial cell
4
colon adenocarcinoma
4
erythroid cell
4
erythroid progenitor cell
4
glial cell
4
glioblastoma cell
4
glioma cell
4
immortal neural cell line cell
4
islet of Langerhans
4
leukemic stem cell
4
lung fibroblast cell line
4
mammary gland epithelial cell
4
melanoma cell
4
natural killer cell
4
pancreas
4
regulatory T cell
4
skeletal muscle satellite cell
4
squamous cell lung carcinoma
4
synovial sarcoma cell
4
tracheal epithelial cell
4
triple-negative breast cancer
3
786-O cell
3
A549
3
AG04449 cell
3
AG04450 cell
3
AG09309 cell
3
AG09319 cell
3
AG10803 cell
3
BE(2)-C
3
BJ cell
3
CD1c-positive myeloid dendritic cell
3
CMK
3
COLO-320 cell
3
Caco-2 cell
3
D341 Med cell
3
G-401 cell
3
GM06990
3
GM12864
3
GM12865
3
GM12878
3
GM19240
3
GM23248
3
H1-hESC
3
HAC cell
3
HAP-1
3
HBMEC cell
3
HCT-116 cell
3
HEK293
3
HL-60
3
HT-29
3
HeLa cell
3
HuH-7
3
IMR-90
3
Ishikawa
3
K562
3
KARPAS-422 cell
3
Kasumi-1
3
LHCN-M2
3
LNCAP
3
LoVo cell
3
MDA-MB-231 cell
3
MG63
3
MM.1S
3
MOLM-13 cell
3
Myoblasts
3
NAMALWA cell
3
NB-4 cell
3
NCCIT cell
3
NHBE cell
3
NHDF cell
3
NHEK
3
NT2-D1 cell
3
Normal Human Astrocytes
3
OCI-AML3
3
OCI-LY7
3
PA-TU-8988T cell
3
PANC-1 cell
3
PC-3
3
PC-9
3
REH cell
3
RKO
3
RPMI8226
3
RWPE1
3
SAEC
3
SK-N-MC
3
SK-N-SH_RA
3
SW480
3
Saos-2 cell
3
T-47D cell
3
Th17 cell
3
U-266 cell
3
U-87 MG
3
U2OS
3
U937
3
WERI-Rb-1
3
WI-38 cell
3
ZR-75-1 cell
3
adipose tissue
3
aortic adventitial fibroblast
3
bone marrow cell
3
cardiac myocyte cell derived cell line
3
chronic lymphocytic leukemia cell
3
colon cancer cell line
3
colon epithelial cell
3
cortex of kidney
3
cortical cell of adrenal gland
3
enterocyte
3
epithelial cell of prostate
3
epithelial ovarian cancer cell
3
esophageal epithelial cell
3
fibroblast of mammary gland
3
fibroblast of pulmonary artery
3
fibroblast of villous mesenchyme
3
foreskin keratinocyte
3
foreskin melanocyte
3
hESC H9
3
hematopoietic cell
3
hematopoietic multipotent progenitor cell
3
iPS DF 4.7 Cell Line
3
lymphoblast
3
mast cell
3
metastatic melanoma
3
midbrain
3
mononuclear cell of bone marrow
3
neoplastic cell
Organ
4
stomach
Date released
3
June, 2020
1
February, 2021
Software used
28
r
15
encode-ccres
14
chromhmm
4
macs
abc
1
qTLtools
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
software_used.software.name!
abc
relevant_life_stage!
adult
Showing 4 of 4 results
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Download
FileSet
DSR497XLY
released
Annotation file set
: Histone modifications annotation for Digestive tract Gastric_primary_sample from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR355FEE
released
Annotation file set
: Accessible chromatin annotation for Digestive tract Stomach from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR769DZK
released
Annotation file set
: Accessible chromatin annotation for Digestive tract Gastric primary sample from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR936OND
released
Annotation file set
: Accessible chromatin annotation for Digestive tract Fetal stomach from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP