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Citing CMDGA
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Annotation type
1
target gene predictions
Annotation Category
1
Target gene links
Annotation type Category
1
Capture-C
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
stem cell
Biosample term
131
monocyte
90
heart
85
stomach
81
kidney
73
brain
67
lung
67
muscle of arm
63
small intestine
62
A549
61
adrenal gland
60
placenta
58
muscle of leg
55
large intestine
54
common myeloid progenitor, CD34-positive
54
muscle of back
52
left lung
51
CD8-positive, alpha-beta T cell
51
neural progenitor cell
48
liver
48
thymus
45
right lung
44
islet of Langerhans
43
B cell
43
hematopoietic multipotent progenitor cell
42
right kidney
40
renal cortex interstitium
40
renal pelvis
40
retina
36
left kidney
35
endothelial cell
35
spinal cord
34
heart left ventricle
33
spleen
32
CD4-positive, alpha-beta memory T cell
31
CD14-positive monocyte
31
adipose tissue
29
macrophage
26
MCF-7
26
hepatocyte
25
K562
25
fibroblast
25
tibial nerve
24
body of pancreas
23
EndoC_BH1
23
epithelial cell of proximal tubule
23
natural killer cell
23
regulatory T cell
23
sigmoid colon
23
trophoblast cell
22
CD8-positive, alpha-beta memory T cell
22
caudate nucleus
22
foreskin keratinocyte
22
pancreas
22
pericyte cell
21
adipocyte
21
glomerular endothelial cell
20
T cell
20
breast cancer cell
20
coronary artery
20
keratinocyte
20
mononuclear cell
20
psoas muscle
20
smooth muscle cell
20
subcutaneous adipose tissue
19
endothelial cell of umbilical vein
19
foreskin fibroblast
19
heart right ventricle
19
ovary
19
pigmented layer of retina
19
right atrium auricular region
18
T-helper 1 cell
18
embryonic stem cell
18
gastrocnemius medialis
18
pancreatic ductal cell
18
substantia nigra
18
thyroid gland
18
tibial artery
18
transverse colon
17
H1-hESC
17
HepG2
17
T-helper 17 cell
17
muscle of trunk
17
omental fat pad
17
osteoblast
16
T-helper 2 cell
16
cardiac muscle cell
16
chorionic villus
16
fibroblast of cardiac tissue
16
fibroblast of lung
16
induced pluripotent stem cell
16
layer of hippocampus
16
mesenchymal stem cell
16
pancreatic alpha cell
16
pancreatic beta cell
16
retinal pigment epithelial cell
16
skeletal muscle myoblast
16
skeletal muscle tissue
16
testis
16
upper lobe of left lung
15
CD4-positive, alpha-beta T cell
15
ascending aorta
15
astrocyte
15
cerebellum
15
frontal cortex
15
neutrophil
14
endocrine pancreas
14
mammary gland epithelial cell
14
pancreatic acinar cell
14
prostate gland
14
putamen
13
Peyer's patch
13
aorta
13
bronchial epithelial cell
13
neurosphere
13
pancreatic delta cell
13
temporal lobe
12
Ammon's horn
12
HeLa-S3
12
excitatory neuron
12
fibroblast of dermis
12
left renal cortex interstitium
12
lymphoblastoid cell line
12
mammary epithelial cell
12
neuroblastoma cell
11
breast epithelium
11
epithelial cell of prostate
11
erythroblast
11
glomerular visceral epithelial cell
11
left renal pelvis
11
naive thymus-derived CD4-positive, alpha-beta T cell
11
right renal pelvis
11
skeletal muscle satellite cell
10
22Rv1
10
Rhabdomyosarcoma
10
choroid plexus epithelial cell
10
esophagus muscularis mucosa
10
esophagus squamous epithelium
10
gastric cancer cell
10
hepatic stellate cell
10
kidney tubule cell
10
neuronal stem cell
10
right renal cortex interstitium
10
skin fibroblast
10
thoracic aorta
10
trophoblast
9
GM12878
9
H9
9
SK-N-DZ
9
SK-N-SH
9
cardiomyocytes
9
colonic mucosa
9
diffuse intrinsic pontine glioma
9
esophagus
9
liposarcoma
9
parathyroid adenoma
9
tongue
8
B-lymphoblastoid cell line
8
GM12865
8
HEK293
8
IMR-90
8
NAMALWA cell
8
cingulate gyrus
8
colon epithelial cell
8
dermis blood vessel endothelial cell
8
duodenal mucosa
8
endodermal cell
8
fibroblast cell line
8
globus pallidus
8
immortal human breast epithelial cell line cell
8
limb
8
lower leg skin
8
mesendoderm
8
myoepithelial cell of mammary gland
8
naive T cell
8
pituitary stalk
8
vagina
7
AG04449 cell
7
BJ cell
7
GM06990
7
GM12864
7
HT-29
7
SK-N-MC
7
T47D
7
WERI-Rb-1
7
amygdala
7
angular gyrus
7
cardiomyocytes (cardiac muscle cell)
7
chorion membrane
7
dermis lymphatic vessel endothelial cell
7
endometrium adenocarcinoma
7
esophageal adenocarcinoma
7
eye
7
fibroblast of pulmonary artery
7
foreskin melanocyte
7
kidney glomerular epithelial cell
7
mature neutrophil
7
renal cortical epithelial cell
7
right lobe of liver
7
stomach smooth muscle
7
uterus
Organ
1
brain
Date released
1
September, 2023
Software used
1
chicago
Lab
1
Struan F.A. Grant, CHOP
Project
1
AMP
RFA
1
AMP2
Showing 1 of 1 results
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Download
FileSet
DSR843RXV
released
Annotation file set
: Target gene annotation of open chromatin regions from promoter capture c of ESC (1frag and 4 frag)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP