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Schema
Citing CMDGA
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Annotation type
37
candidate regulatory elements
23
target gene predictions
20
chromatin state
3
accessible chromatin
1
eQTL
0
variant to gene
Annotation Category
3
cis-regulatory elements
Annotation type Category
2
snATAC-seq
1
DNase-seq
Available data
3
bed bed3+
2
bigWig
File set status
3
released
Genome assembly (visualization)
3
hg19
2
GRCh38
Organism
3
Homo sapiens
Biosample type
2
primary cell
1
tissue
Biosample term
1
enterocyte of epithelium of small intestine
1
small intestine
1
small intestine goblet cell
Organ
200
epithelium
82
connective tissue
59
pancreas
57
eye
45
kidney
34
vasculature
33
brain
25
blood vessel
25
musculature of body
23
heart
21
liver
19
limb
17
intestine
11
lung
11
skin of body
10
artery
10
bone element
9
extraembryonic component
8
skeleton
8
stomach
7
adrenal gland
6
adipose tissue
6
embryo
6
large intestine
6
mammary gland
4
esophagus
4
gonad
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
ovary
2
spleen
2
thymus
2
thyroid gland
2
vein
1
blood
1
bodily fluid
1
breast
1
lymphoid tissue
1
mouth
1
nose
1
prostate gland
1
spinal cord
1
testis
1
tongue
1
trachea
1
urinary bladder
Date released
2
November, 2021
1
June, 2020
Software used
3
macs
Lab
2
Bing Ren, UCSD
1
AMP-T2D consortium
Project
2
ENCODE
1
AMP
RFA
2
ENCODE3
1
AMP
biosample_type!
cell line
Showing 3 of 3 results
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Download
FileSet
DSR459YTN
released
Annotation file set
: Accessible chromatin annotation of Small Intestinal Goblet Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR273VIV
released
Annotation file set
: Accessible chromatin annotation of Small Intestinal Enterocyte from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR074FIF
released
Annotation file set
: Accessible chromatin annotation for Digestive tract Intestine, Small from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP