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Schema
Citing CMDGA
Clear Filters
Annotation type
4
candidate regulatory elements
3
accessible chromatin
3
target gene predictions
2
binding sites
2
chromatin state
1
histone modifications
1
variant allelic effects
Annotation Category
3
cis-regulatory elements
Annotation type Category
2
snATAC-seq
1
DNase-seq
Available data
3
bed bed3+
2
bigWig
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
2
club cell
1
bronchial epithelial cell
Organ
181
epithelium
78
connective tissue
57
eye
57
pancreas
33
brain
30
kidney
30
vasculature
23
heart
21
blood vessel
20
musculature of body
19
limb
17
intestine
12
liver
11
lung
11
skin of body
10
artery
10
bone element
9
extraembryonic component
8
skeleton
8
stomach
7
adrenal gland
6
adipose tissue
6
embryo
6
large intestine
6
mammary gland
4
esophagus
4
gonad
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
ovary
2
spleen
2
thymus
2
thyroid gland
2
vein
1
blood
1
bodily fluid
1
breast
1
lymphoid tissue
1
mouth
1
nose
1
prostate gland
1
spinal cord
1
testis
1
tongue
1
trachea
1
urinary bladder
Date released
1
April, 2020
1
June, 2020
1
November, 2021
Software used
2
macs
Lab
1
AMP-T2D consortium
1
Bing Ren, UCSD
1
Xin Sun, UCSD
Project
1
AMP
1
ENCODE
1
LungMap
RFA
1
AMP
1
ENCODE3
1
LungMap2
biosample_type!
cell line
award.rfa!
AMP2
Showing 3 of 3 results
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Download
FileSet
DSR848VTY
released
Annotation file set
: ATAC-seq peaks in club cells from lung snATAC-seq
Lab:
Xin Sun, UCSD
Project:
LungMap
FileSet
DSR678WWH
released
Annotation file set
: Accessible chromatin annotation of Club Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR613FQC
released
Annotation file set
: Accessible chromatin annotation for Lung Bronchial epithelial cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP