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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
binding sites
1
histone modifications
Annotation Category
3
cis-regulatory elements
Annotation type Category
2
ChIP-seq
1
DNase-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
in vitro differentiated cells
Biosample term
105
monocyte
33
CD8-positive, alpha-beta T cell
26
neural progenitor cell
25
retina
20
pigmented layer of retina
19
endothelial cell
18
fibroblast
13
excitatory neuron
13
hepatocyte
13
kidney
12
endothelial cell of hepatic sinusoid
11
macrophage
11
pancreatic ductal cell
11
retinal pigment epithelial cell
9
astrocyte
9
osteoblast
9
pericyte cell
9
smooth muscle cell
8
T-cell acute lymphoblastic leukemia
8
adipocyte
8
embryonic stem cell
8
neuroblastoma cell line
8
pancreatic beta cell
7
B cell
7
heart
7
islet of Langerhans
7
liver
7
mammary epithelial cell
7
neuronal stem cell
7
pancreas
7
pancreatic acinar cell
7
pancreatic alpha cell
6
T cell
6
brain
6
glutamatergic neuron
5
SGBS preadipocytes
5
Th1 cell
5
chondrocyte
5
erythroblast
5
foreskin fibroblast
5
inhibitory neuron
5
keratinocyte
5
mammary gland epithelial cell
5
mesenchymal stem cell
5
pancreatic delta cell
5
prostate gland
5
regulatory T cell
5
skeletal muscle fiber
5
skeletal muscle satellite cell
5
tracheal epithelial cell
4
acute myeloid leukemia cell
4
adipose-derived stem cell
4
aortic endothelial cell
4
bronchial epithelial cell
4
colon adenocarcinoma
4
erythroid cell
4
erythroid progenitor cell
4
heart left ventricle
4
hepatic stellate cell
4
natural killer cell
4
pancreatic stellate cell
4
placenta
4
preadipocyte
4
rhabdomyosarcoma cell
4
stomach
3
cardiac fibroblast
3
CD1c-positive myeloid dendritic cell
3
Ishikawa
3
Th17 cell
3
adipose tissue
3
aortic adventitial fibroblast
3
bone marrow cell
3
caudate nucleus
3
colon epithelial cell
3
coronary artery
3
cortex of kidney
3
cortical cell of adrenal gland
3
enterocyte
3
esophageal adenocarcinoma
3
fibroblast of mammary gland
3
fibroblast of pulmonary artery
3
fibroblast of villous mesenchyme
3
foreskin keratinocyte
3
foreskin melanocyte
3
gabaergic neuron
3
globus pallidus
3
hematopoietic multipotent progenitor cell
3
iPS DF 4.7 Cell Line
3
mast cell
3
mesendoderm
3
midbrain
3
mononuclear cell of bone marrow
3
naive thymus-derived CD4-positive, alpha-beta T cell
3
neoplastic cell
3
occipital lobe
3
pancreatic ductal adenocarcinoma
3
peripheral blood stem cell
3
plasma cell
3
pre-B acute lymphoblastic leukemia cell
3
prefrontal cortex
3
pulmonary artery endothelial cell
3
pulmonary interstitial fibroblast
3
putamen
3
renal epithelial cell
3
right atrium auricular region
3
skeletal muscle myoblast
3
skin fibroblast
3
spleen
3
superior temporal gyrus
3
testis
3
thymus
3
tibial artery
3
tibial nerve
3
type I muscle cell
3
type II muscle cell
3
type II pneumocyte
3
upper lobe of left lung
2
Adipose stromal cell
2
Ammon's horn
2
B-lymphocyte
2
BICR 31
2
CD34-positive, CD38-negative hematopoietic stem cell
2
CD4-positive helper T cell
2
CD8-Positive T-Lymphocytes
2
EAhy 926 cell
2
Muller cell
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
Rhabdoid Tumor of the Kidney
2
T-lymphoma cell line
2
Th2 cell
2
atypical teratoid rhabdoid tumor
2
blood vessel smooth muscle cell
2
breast carcinoma
2
cardiac muscle cell
2
cardiac muscle myoblast
2
cerebellum
2
chronic lymphocytic leukemia cell
2
chronic myelomonocytic leukemia
2
colorectal adenocarcinoma
2
colorectal cancer
2
columnar chondrocyte
2
dermis microvascular lymphatic vessel endothelial cell
2
differentiating adipose-derived stem cell
2
diffuse intrinsic pontine glioma
2
diffuse large B-cell lymphoma
2
endocardial cell
2
endometrial stromal cell
2
endometrial stromal tumor
2
endometriosis
2
endometrium cancer
2
endothelial cell of lymphatic vessel
2
endothelial cell of umbilical vein
2
enteric neuron
2
enteric smooth muscle cell
2
epidermal stem cell
2
fetal cardiomyocyte
2
fibroblast of cardiac tissue
2
first pancreatic bud
2
frontal cortex
2
glial cell
2
glomerular endothelial cell
2
glomerular visceral epithelial cell
2
head and neck squamous cell carcinoma
2
kidney epithelium
2
kidney glomerular epithelial cell
2
kidney tubule cell
2
large intestine
2
layer of hippocampus
2
leukemic stem cell
2
leukocyte
2
luminal epithelial cell of mammary gland
2
mammary gland
2
mantle cell lymphoma cell
2
mature neutrophil
2
medulloblastoma cell line
2
megakaryocyte
2
memory B cell
2
mesangial cell
2
meso-epithelial cell
2
mesothelial cell
2
muscle of leg
2
myotube
2
neuron
2
neutrophil
2
oligodendrocyte
2
oligodendrocyte precursor cell
2
omental fat pad
2
osteosarcoma
2
pancreatic polypeptide-secreting cell
2
peripheral blood mononuclear cell
2
peripheral blood-derived erythroblast
2
pons
2
primordial germ cell
2
prostate gland cancer cell
2
renal cortical epithelial cell
2
renal pelvis
2
renal proximal tubule cell
2
respiratory system smooth muscle
2
schwann cell
2
skin of forearm
Date released
2
February, 2021
1
June, 2020
Software used
21
r
10
chromhmm
9
encode-ccres
3
macs
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
biosample_type!
cell line
Showing 3 of 3 results
table-tab-icon
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Download
FileSet
DSR383WGV
released
Annotation file set
: Histone modifications annotation for Blood Hematopoietic_Stem_Cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR818RAD
released
Annotation file set
: Binding sites annotation for Blood Hematopoietic_Stem_Cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR365ACB
released
Annotation file set
: Accessible chromatin annotation for Blood Hematopoietic Stem Cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP