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Schema
Citing CMDGA
Clear Filters
Annotation type
3
candidate regulatory elements
3
target gene predictions
2
chromatin state
1
accessible chromatin
1
binding sites
1
histone modifications
Annotation Category
3
Target gene links
3
cis-regulatory elements
Annotation type Category
6
DNase-seq
5
ChIP-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
6
bed bed3+
File set status
6
released
Genome assembly (visualization)
6
hg19
Organism
6
Homo sapiens
Biosample type
6
in vitro differentiated cells
1
primary cell
1
stem cell
Biosample term
29
hematopoietic multipotent progenitor cell
10
adipocyte
10
neural progenitor cell
6
dendritic cell
6
endodermal cell
6
mesenchymal stem cell
5
cardiac muscle cell
5
mesodermal cell
4
bipolar neuron
4
mesendoderm
4
muscle cell
4
neural cell
4
trophoblast cell
3
cardiomyocytes (cardiac muscle cell)
3
ectodermal cell
3
hepatocyte
3
islet precursor cell
3
neuron
3
neuronal stem cell
3
smooth muscle cell
2
cardiac mesoderm primordium
2
cardiac myoblast
2
cardiovascular progenitor cell
2
lymphocyte of B lineage (iPSC)
2
myotube
2
neuroepithelial stem cell
2
olfactory neurosphere cell line
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
cardiac precursors (cardiac muscle cell)
1
ecto neural progenitor cell
1
embryonic stem cell
1
mid-neurogenesis radial glial cells
1
myocyte
1
radial glial cell
1
skeletal muscle myoblast
1
white adipose cell
Organ
6
connective tissue
Life stage
3
embryonic
2
adult
Date released
4
September, 2022
1
February, 2021
1
May, 2021
Software used
4
r
1
abc
1
encode-ccres
Lab
5
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
6
AMP
RFA
6
AMP
biosample_type!
cell line
Showing 6 of 6 results
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Download
FileSet
DSR902OPF
released
Annotation file set
: Candidate regulatory elements for BSS01261 mesenchymal stem cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR329XEJ
released
Annotation file set
: Candidate regulatory elements for BSS01260 mesenchymal stem cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR607MNF
released
Annotation file set
: Target gene predictions for BSS01261 mesenchymal stem cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR391CWH
released
Annotation file set
: Target gene predictions for BSS01260 mesenchymal stem cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR718ELE
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE mesenchymal stem cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR170XIW
released
Annotation file set
: enhancer-gene predicton of H1_Derived_Mesenchymal_Stem_Cells-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP