Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
3
accessible chromatin
2
target gene predictions
1
caQTL
1
eQTL
1
gene expression
Annotation Category
2
Target gene links
Annotation type Category
3
DNase-seq
ChIP-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
1
pCHi-C
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
1
in vitro differentiated cells
1
stem cell
Biosample term
15
CD14-positive monocyte
9
pericyte cell
7
endothelial cell
6
dendritic cell
6
olfactory receptor cell
6
smooth muscle cell
5
CD8-positive, alpha-beta T cell
4
adipocyte
4
fibroblast
4
pancreatic delta cell
4
psoas muscle
3
CD4-positive, alpha-beta T cell
3
adrenal gland
3
astrocyte
3
cardiomyocytes (cardiac muscle cell)
3
colon epithelial cell
3
keratinocyte
3
liver
3
macrophage
3
pancreas
3
pancreatic A cell
3
pancreatic acinar cell
3
pancreatic alpha cell
3
pancreatic beta cell
3
pancreatic ductal cell
3
thymus
3
type B pancreatic cell
2
B cell
2
CD4-positive helper T cell
2
T-cell
2
activated CD4-positive, alpha-beta T cell
2
adipose tissue
2
aorta
2
blood vessel smooth muscle cell
2
cortical cell of adrenal gland
2
endothelial cell of umbilical vein
2
enteric smooth muscle cell
2
erythroblast
2
gabaergic neuron
2
glutamatergic neuron
2
heart left ventricle
2
heart right ventricle
2
hepatocyte
2
luminal epithelial cell of mammary gland
2
lymphocyte of B lineage (iPSC)
2
megakaryocyte
2
memory B cell
2
mesenchymal stem cell
2
mesendoderm
2
monocyte
2
naive B cell
2
naive thymus-derived CD4-positive, alpha-beta T cell
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
natural killer cell
2
ovary
2
sigmoid colon
2
small intestine
2
smooth muscle cell of the esophagus
2
spleen
2
stomach
2
trophoblast cell
2
type II pneumocyte
1
Ammon's horn
1
B cell, CD19-positive
1
CD56-positive, CD161-positive immature natural killer cell
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
activated CD8-positive, alpha-beta T cell
1
adult endothelial progenitor cell
1
alternatively activated macrophage
1
alveolar macrophage
1
basal cell
1
basal cell of epidermis
1
beige adipocyte
1
bipolar neuron
1
bladder (urinary bladder)
1
body of pancreas
1
breast epithelium
1
cardiac endothelial cell
1
cardiac muscle cell
1
cardiac precursors (cardiac muscle cell)
1
cardiac ventricle
1
cell
1
ciliated cell
1
club cell
1
colon goblet cell
1
common myeloid progenitor, CD34-positive
1
conventional dendritic cell
1
coronary artery
1
dorsolateral prefrontal cortex
1
eccrine cell
1
embryonic stem cell
1
endocardial cell
1
endothelial cell of lymphatic vessel
1
enteric neuron
1
enterochromaffin-like cell
1
enterocyte of epithelium of small intestine
1
epithelial cell of prostate
1
esophagus
1
fat cell
1
fibroblast of arm
1
fibroblast of cardiac tissue
1
fibroblast of dermis
1
fibroblast of lung
1
foreskin fibroblast
1
foveolar cell of stomach
1
gastric (mucosa of stomach)
1
gastrocnemius medialis
1
granular cell of epidermis
1
heart
1
inflammatory macrophage
1
intestinal tuft cell
1
islet of Langerhans
1
large intestine
1
lung
1
luteal cell
1
mammary epithelial cell
1
mammary gland epithelial cell
1
mast cell
1
mature NK T cell
1
megakaryocyte-erythroid progenitor cell
1
melanocyte
1
mesothelial cell
1
microglial cell
1
muscle of leg
1
muscle of trunk
1
myoepithelial cell
1
myotube
1
naive t cell
1
natural killer cell mediated cytotoxicity
1
neural progenitor cell
1
neuronal stem cell
1
neutrophil
1
non keratinizing barrier epithelial cell
1
non-classical monocyte
1
oligodendrocyte
1
oligodendrocyte precursor cell
1
osteoblast
1
pancreatic polypeptide-secreting cell
1
pancreatic stellate cell
1
paneth cell
1
parietal cell
1
peptic cell
1
placenta
1
plasma cell
1
plasmacytoid dendritic cell
1
regular atrial cardiac myocyte
1
regulatory T cell
1
respiratory goblet cell
1
right cardiac atrium
1
schwann cell
1
skeletal muscle fibroblast
1
skeletal muscle myoblast
1
skeletal muscle satellite cell
1
skin fibroblast
1
small intestine goblet cell
1
smooth muscle cell of the coronary artery
1
spinal cord
1
stellate neuron
1
stomach neuroendocrine cell
1
stromal cell
1
thyroid follicular cell
1
thyroid gland
1
transverse colon
1
trophoblast
1
type I cell of adrenal cortex
1
type I muscle cell
1
type I pneumocyte
1
type II cell of adrenal cortex
1
type II muscle cell
1
undifferentiated ESC (H9 cell line)
1
uterine smooth muscle cell
1
uterus
1
ventricular cardiac muscle cell
1
white adipose cell
1
white adipose tissue
Organ
2
connective tissue
Date released
1
March, 2020
1
May, 2021
Software used
1
abc
1
nospecificsoft_customcode
Lab
1
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
2
AMP
RFA
2
AMP
biosample_type!
cell line
annotation_type_category!
ChIP-seq
Showing 2 of 2 results
table-tab-icon
matrix-icon
Download
FileSet
DSR170XIW
released
Annotation file set
: enhancer-gene predicton of H1_Derived_Mesenchymal_Stem_Cells-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR333DPA
released
Annotation file set
: A target gene prediction annotation in Human Mesenchymal Stem Cell of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP