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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
1
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
2
cis-regulatory elements
1
Target gene links
Annotation type Category
3
ChIP-seq
2
DNase-seq
Available data
2
bed bed3+
1
bed bed9
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
in vitro differentiated cells
Biosample term
57
heart
57
stomach
48
brain
48
lung
48
muscle of arm
45
small intestine
42
adrenal gland
42
kidney
42
placenta
39
common myeloid progenitor, CD34-positive
39
left lung
39
muscle of back
39
muscle of leg
38
large intestine
33
right lung
33
thymus
30
hematopoietic multipotent progenitor cell
30
right kidney
27
CD4-positive, alpha-beta memory T cell
27
left kidney
27
renal cortex interstitium
27
renal pelvis
24
B cell
21
CD8-positive, alpha-beta memory T cell
21
liver
21
spinal cord
18
adipose tissue
18
mononuclear cell
18
spleen
15
heart left ventricle
15
sigmoid colon
15
trophoblast cell
12
CD14-positive monocyte
12
T cell
12
body of pancreas
12
chorionic villus
12
endocrine pancreas
12
foreskin keratinocyte
12
gastrocnemius medialis
12
muscle of trunk
12
neural progenitor cell
12
ovary
12
psoas muscle
12
thyroid gland
12
transverse colon
9
Peyer's patch
9
T-helper 1 cell
9
T-helper 17 cell
9
T-helper 2 cell
9
caudate nucleus
9
chorion membrane
9
fibroblast of cardiac tissue
9
fibroblast of dermis
9
fibroblast of lung
9
heart right ventricle
9
layer of hippocampus
9
mammary gland epithelial cell
9
naive T cell
9
natural killer cell
9
neurosphere
9
regulatory T cell
9
retina
9
skeletal muscle tissue
9
testis
9
tibial nerve
9
upper lobe of left lung
6
Brodmann (1909) area 46
6
adipocyte
6
angular gyrus
6
aorta
6
ascending aorta
6
breast epithelium
6
bronchial epithelial cell
6
cerebellum
6
cingulate gyrus
6
colonic mucosa
6
coronary artery
6
dermis blood vessel endothelial cell
6
dermis lymphatic vessel endothelial cell
6
duodenal mucosa
6
endodermal cell
6
endothelial cell of umbilical vein
6
epithelial cell of prostate
6
esophagus
6
esophagus muscularis mucosa
6
esophagus squamous epithelium
6
eye
6
fibroblast of breast
6
frontal cortex
6
hepatocyte
6
keratinocyte
6
kidney tubule cell
6
left renal cortex interstitium
6
left renal pelvis
6
limb
6
lower leg skin
6
mesenchymal stem cell
6
mucosa of rectum
6
muscle cell
6
muscle layer of colon
6
muscle layer of duodenum
6
myoepithelial cell of mammary gland
6
neutrophil
6
omental fat pad
6
pancreas
6
parathyroid adenoma
6
prostate gland
6
right atrium auricular region
6
right renal cortex interstitium
6
right renal pelvis
6
skeletal muscle myoblast
6
skin fibroblast
6
stomach smooth muscle
6
substantia nigra
6
temporal lobe
6
thoracic aorta
6
tibial artery
6
tongue
6
trophoblast
6
urinary bladder
6
vagina
3
Ammon's horn
3
CD1c-positive myeloid dendritic cell
3
amnion
3
amnion mesenchymal stem cell
3
amniotic stem cell
3
aortic endothelial cell
3
arm bone
3
astrocyte
3
astrocyte of the cerebellum
3
astrocyte of the hippocampus
3
astrocyte of the spinal cord
3
bipolar neuron
3
brain microvascular endothelial cell
3
cardiac mesoderm primordium
3
cardiac muscle cell
3
cerebellar cortex
3
choroid plexus epithelial cell
3
ectodermal cell
3
embryonic facial prominence
3
epidermal melanocyte
3
epithelial cell of amnion
3
epithelial cell of esophagus
3
epithelial cell of proximal tubule
3
femur
3
fibroblast of gingiva
3
fibroblast of mammary gland
3
fibroblast of peridontal ligament
3
fibroblast of pulmonary artery
3
fibroblast of the aortic adventitia
3
fibroblast of the conjunctiva
3
fibroblast of villous mesenchyme
3
foreskin fibroblast
3
foreskin melanocyte
3
gastroesophageal sphincter
3
germinal center
3
germinal matrix
3
globus pallidus
3
glomerular endothelial cell
3
glomerular visceral epithelial cell
3
hepatic stellate cell
3
inferior parietal cortex
3
iris pigment epithelial cell
3
islet precursor cell
3
kidney capillary endothelial cell
3
kidney epithelial cell
3
kidney glomerular epithelial cell
3
left cardiac atrium
3
leg bone
3
luminal epithelial cell of mammary gland
3
lung microvascular endothelial cell
3
mammary stem cell
3
medulla oblongata
3
mesendoderm
3
mesodermal cell
3
midbrain
3
middle frontal gyrus
3
mucosa of stomach
3
neural cell
3
neuron
3
non-pigmented ciliary epithelial cell
3
occipital lobe
3
olfactory neurosphere cell line
3
osteoblast
3
pericyte cell
3
pons
3
pulmonary artery endothelial cell
3
putamen
3
rectum smooth muscle tissue
3
regular cardiac myocyte
3
renal cortical epithelial cell
3
retinal pigment epithelial cell
3
right cardiac atrium
3
right lobe of liver
3
skeletal muscle cell
3
skeletal muscle satellite cell
3
skin of body
3
smooth muscle cell
3
smooth muscle cell of the brain vasculature
3
stromal cell of bone marrow
Life stage
3
embryonic
Date released
3
February, 2021
3
September, 2022
1
June, 2020
1
March, 2020
1
May, 2021
Software used
2
r
1
chromhmm
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
biosample_type!
cell line
Showing 3 of 3 results
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Download
FileSet
DSR507CRE
released
Annotation file set
: Candidate regulatory elements for BSS01263 mesendoderm from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR401CTI
released
Annotation file set
: Target gene predictions for BSS01263 mesendoderm from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR387DPA
released
Annotation file set
: Chromatin states for BSS01263 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP