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Schema
Citing CMDGA
Clear Filters
Annotation type
16
histone modifications
10
accessible chromatin
4
chromatin state
1
candidate regulatory elements
1
target gene predictions
Annotation Category
1
Target gene links
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
1
DNase-seq
1
pCHi-C
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
in vitro differentiated cells
Biosample term
23
stomach
19
CD14-positive monocyte
19
heart
18
lung
17
adrenal gland
17
muscle of arm
16
small intestine
15
common myeloid progenitor, CD34-positive
15
kidney
15
large intestine
15
muscle of back
15
muscle of leg
13
brain
13
left lung
13
placenta
12
CD8-positive, alpha-beta T cell
12
thymus
11
CD4-positive, alpha-beta T cell
11
renal cortex interstitium
11
right lung
11
spleen
10
renal pelvis
10
right kidney
9
hematopoietic multipotent progenitor cell
9
left kidney
9
liver
9
pericyte cell
8
B cell
8
heart left ventricle
8
spinal cord
7
endothelial cell
7
foreskin keratinocyte
7
psoas muscle
7
sigmoid colon
7
smooth muscle cell
6
T-cell
6
adipocyte
6
cardiac muscle cell
6
dendritic cell
6
endothelial cell of umbilical vein
6
foreskin fibroblast
6
naive thymus-derived CD4-positive, alpha-beta T cell
6
olfactory receptor cell
6
ovary
6
pancreas
6
trophoblast cell
5
CD4-positive, alpha-beta memory T cell
5
body of pancreas
5
gastrocnemius medialis
5
heart right ventricle
5
muscle of trunk
5
natural killer cell
5
subcutaneous abdominal adipose tissue
5
thyroid gland
5
transverse colon
4
Peyer's patch
4
aorta
4
astrocyte
4
breast epithelium
4
chorionic villus
4
dermis blood vessel endothelial cell
4
esophagus squamous epithelium
4
fibroblast
4
fibroblast of lung
4
gastroesophageal sphincter
4
keratinocyte
4
left renal cortex interstitium
4
left renal pelvis
4
lower leg skin
4
mammary epithelial cell
4
mesenchymal stem cell
4
neurosphere
4
pancreatic delta cell
4
peripheral blood mononuclear cell
4
right renal pelvis
4
testis
4
upper lobe of left lung
3
T-helper 1 cell
3
adipose tissue
3
cardiac fibroblast
3
cardiomyocytes (cardiac muscle cell)
3
colon epithelial cell
3
endocrine pancreas
3
epithelial cell of prostate
3
esophagus
3
esophagus muscularis mucosa
3
foreskin melanocyte
3
hepatocyte
3
layer of hippocampus
3
macrophage
3
mesendoderm
3
mesodermal cell
3
neuronal stem cell
3
neutrophil
3
omental fat pad
3
pancreatic A cell
3
pancreatic acinar cell
3
pancreatic alpha cell
3
pancreatic beta cell
3
pancreatic ductal cell
3
parathyroid adenoma
3
regulatory T cell
3
retina
3
right renal cortex interstitium
3
skeletal muscle myoblast
3
skeletal muscle tissue
3
substantia nigra
3
suprapubic skin
3
temporal lobe
3
tibial nerve
3
trophoblast
3
type B pancreatic cell
3
uterus
2
Ammon's horn
2
CD4-positive helper T cell
2
T-helper 17 cell
2
T-helper 2 cell
2
activated CD4-positive, alpha-beta T cell
2
angular gyrus
2
ascending aorta
2
bipolar neuron
2
blood vessel smooth muscle cell
2
bronchial epithelial cell
2
cardiac myoblast
2
cardiovascular progenitor cell
2
caudate nucleus
2
chorion
2
cingulate gyrus
2
colonic mucosa
2
coronary artery
2
cortical cell of adrenal gland
2
dermis microvascular lymphatic vessel endothelial cell
2
duodenal mucosa
2
endodermal cell
2
enteric smooth muscle cell
2
erythroblast
2
eye
2
fibroblast of breast
2
fibroblast of dermis
2
gabaergic neuron
2
glutamatergic neuron
2
luminal epithelial cell of mammary gland
2
lung microvascular endothelial cell
2
lymphocyte of B lineage (iPSC)
2
megakaryocyte
2
memory B cell
2
middle frontal area 46
2
monocyte
2
mucosa of rectum
2
muscle layer of colon
2
muscle layer of duodenum
2
myoepithelial cell of mammary gland
2
myotube
2
naive B cell
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
neural cell
2
neural progenitor cell
2
neuroepithelial stem cell
2
osteoblast
2
placental basal plate
2
prostate gland
2
right cardiac atrium
2
skeletal muscle satellite cell
2
smooth muscle cell of the esophagus
2
stomach smooth muscle
2
subcutaneous adipose tissue
2
thoracic aorta
2
tongue
2
type II pneumocyte
2
vagina
1
B cell, CD19-positive
1
CD1c-positive myeloid dendritic cell
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
CD56-positive, CD161-positive immature natural killer cell
1
CD8-positive, alpha-beta memory T cell
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
activated CD8-positive, alpha-beta T cell
1
adult endothelial progenitor cell
1
alternatively activated macrophage
1
alveolar macrophage
1
amnion
1
amniotic epithelial cell
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
astrocyte of the spinal cord
1
basal cell
1
basal cell of epidermis
1
beige adipocyte
1
bladder (urinary bladder)
1
brain microvascular endothelial cell
1
brain pericyte
1
cardiac endothelial cell
1
cardiac precursors (cardiac muscle cell)
1
cardiac ventricle
1
cell
1
cerebellar cortex
1
cerebellum
Life stage
1
embryonic
Date released
1
February, 2021
1
March, 2020
Software used
r
1
encode-ccres
1
nospecificsoft_customcode
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
biosample_type!
cell line
software_used.software.name!
r
Showing 2 of 2 results
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Download
FileSet
DSR859OBP
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE neural progenitor cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR727XIO
released
Annotation file set
: A target gene prediction annotation in Human Neural Prgenitor Cell of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP