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Citing CMDGA
Clear Filters
Annotation type
1
target gene predictions
Annotation Category
1
Target gene links
Annotation type Category
1
Capture-C
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
stem cell
Biosample term
127
monocyte
90
heart
85
stomach
81
kidney
71
brain
67
lung
67
muscle of arm
62
small intestine
61
adrenal gland
59
placenta
58
muscle of leg
56
large intestine
54
common myeloid progenitor, CD34-positive
54
muscle of back
52
left lung
51
CD8-positive, alpha-beta T cell
48
liver
48
thymus
47
neural progenitor cell
45
right lung
44
B cell
43
hematopoietic multipotent progenitor cell
42
islet of Langerhans
42
right kidney
41
endothelial cell
40
renal cortex interstitium
40
renal pelvis
40
retina
37
hepatocyte
36
left kidney
33
heart left ventricle
33
spleen
32
CD4-positive, alpha-beta memory T cell
31
CD14-positive monocyte
31
adipose tissue
30
spinal cord
29
fibroblast
27
adipocyte
26
regulatory T cell
25
smooth muscle cell
24
body of pancreas
24
pancreatic ductal cell
24
tibial nerve
23
epithelial cell of proximal tubule
23
sigmoid colon
23
trophoblast cell
22
CD8-positive, alpha-beta memory T cell
22
T-helper 1 cell
22
foreskin keratinocyte
22
natural killer cell
22
pericyte cell
21
T cell
21
caudate nucleus
21
glomerular endothelial cell
21
pancreas
20
T-helper 17 cell
20
coronary artery
20
endothelial cell of umbilical vein
20
macrophage
20
mononuclear cell
20
pigmented layer of retina
20
psoas muscle
20
subcutaneous adipose tissue
19
heart right ventricle
19
mesenchymal stem cell
19
ovary
18
gastrocnemius medialis
18
pancreatic beta cell
18
right atrium auricular region
18
tibial artery
17
muscle of trunk
17
omental fat pad
17
osteoblast
17
pancreatic alpha cell
17
thyroid gland
17
transverse colon
16
T-helper 2 cell
16
ascending aorta
16
astrocyte
16
chorionic villus
16
endothelial cell of hepatic sinusoid
16
fibroblast of lung
16
foreskin fibroblast
16
keratinocyte
16
retinal pigment epithelial cell
16
skeletal muscle myoblast
16
skeletal muscle tissue
16
testis
16
upper lobe of left lung
15
CD4-positive, alpha-beta T cell
15
cerebellum
15
embryonic stem cell
15
endocrine pancreas
15
frontal cortex
15
layer of hippocampus
15
mammary gland epithelial cell
15
pancreatic acinar cell
15
pancreatic delta cell
15
substantia nigra
14
Peyer's patch
14
cardiac muscle cell
14
neutrophil
13
aorta
13
excitatory neuron
13
neurosphere
13
skeletal muscle satellite cell
13
temporal lobe
12
Ammon's horn
12
bronchial epithelial cell
12
fibroblast of cardiac tissue
12
fibroblast of dermis
12
left renal cortex interstitium
12
mammary epithelial cell
12
prostate gland
12
putamen
11
breast epithelium
11
cardiomyocytes
11
erythroblast
11
esophagus squamous epithelium
11
glomerular visceral epithelial cell
11
left cardiac atrium
11
left renal pelvis
11
naive thymus-derived CD4-positive, alpha-beta T cell
11
right renal pelvis
10
angular gyrus
10
chorion membrane
10
colonic mucosa
10
dermis blood vessel endothelial cell
10
kidney tubule cell
10
neuronal stem cell
10
pancreatic stellate cell
10
right renal cortex interstitium
10
thoracic aorta
10
trophoblast
9
cingulate gyrus
9
duodenal mucosa
9
esophagus muscularis mucosa
9
foreskin melanocyte
9
hepatic stellate cell
9
parathyroid adenoma
9
skin fibroblast
9
tongue
8
T-cell acute lymphoblastic leukemia
8
cardiomyocytes (cardiac muscle cell)
8
endodermal cell
8
epithelial cell of prostate
8
esophagus
8
extended pluripotent stem (EPS) cells
8
eye
8
fibroblast of breast
8
fibroblast of mammary gland
8
fibroblast of pulmonary artery
8
globus pallidus
8
induced pluripotent stem cell
8
limb
8
lower leg skin
8
mesendoderm
8
myoepithelial cell of mammary gland
8
naive T cell
8
progenitor cell of endocrine pancreas
8
skeletal muscle fiber
8
vagina
7
CD1c-positive myeloid dendritic cell
7
CD4-positive helper T cell
7
choroid plexus epithelial cell
7
dendritic cell
7
fibroblast of villous mesenchyme
7
kidney glomerular epithelial cell
7
mature neutrophil
7
memory B cell
7
renal cortical epithelial cell
7
right lobe of liver
7
stomach smooth muscle
6
Brodmann (1909) area 46
6
T-cell
6
alternatively activated macrophage
6
amygdala
6
astrocyte of the cerebellum
6
astrocyte of the hippocampus
6
bipolar neuron
6
cardiac precursors (cardiac muscle cell)
6
cerebellum (Hemisphere)
6
colon epithelial cell
6
cortical cell of adrenal gland
6
dermis lymphatic vessel endothelial cell
6
enterocyte
6
epithelial cell of esophagus
6
gamma-delta T cell
6
glutamatergic neuron
6
hypothalamus
6
midbrain
6
middle frontal gyrus
6
mucosa of rectum
6
naive thymus-derived CD8-positive, alpha-beta T cell
6
neuroblastoma cell line
6
occipital lobe
6
plasma cell
6
superior temporal gyrus
6
type I muscle cell
6
urinary bladder
Organ
1
brain
Date released
1
September, 2023
Software used
1
chicago
Lab
1
Struan F.A. Grant, CHOP
Project
1
AMP
RFA
1
AMP2
biosample_type!
cell line
month_released!
January, 2022
Showing 1 of 1 results
table-tab-icon
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Download
FileSet
DSR843RXV
released
Annotation file set
: Target gene annotation of open chromatin regions from promoter capture c of ESC (1frag and 4 frag)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP