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Citing CMDGA
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Annotation type
1
target gene predictions
Annotation Category
1
Target gene links
Annotation type Category
1
Capture-C
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
stem cell
Biosample term
130
monocyte
90
heart
86
stomach
81
kidney
73
brain
68
lung
67
muscle of arm
63
small intestine
62
adrenal gland
60
placenta
58
muscle of leg
56
large intestine
54
common myeloid progenitor, CD34-positive
54
muscle of back
52
left lung
49
CD8-positive, alpha-beta T cell
49
liver
48
thymus
47
neural progenitor cell
45
right lung
44
islet of Langerhans
43
hematopoietic multipotent progenitor cell
42
right kidney
41
B cell
40
renal cortex interstitium
40
renal pelvis
40
retina
36
left kidney
35
hepatocyte
34
heart left ventricle
34
spleen
32
CD4-positive, alpha-beta memory T cell
32
adipose tissue
31
CD14-positive monocyte
31
spinal cord
28
regulatory T cell
26
adipocyte
25
endothelial cell
25
tibial nerve
24
body of pancreas
23
T-helper 1 cell
23
epithelial cell of proximal tubule
23
natural killer cell
23
sigmoid colon
23
trophoblast cell
22
CD8-positive, alpha-beta memory T cell
22
caudate nucleus
22
foreskin keratinocyte
22
pancreas
21
T-helper 17 cell
21
coronary artery
21
glomerular endothelial cell
21
pancreatic ductal cell
21
subcutaneous adipose tissue
20
endothelial cell of umbilical vein
20
mononuclear cell
20
ovary
20
pigmented layer of retina
20
psoas muscle
19
T cell
19
heart right ventricle
19
mesenchymal stem cell
19
right atrium auricular region
18
gastrocnemius medialis
18
substantia nigra
18
thyroid gland
18
tibial artery
18
transverse colon
17
T-helper 2 cell
17
macrophage
17
muscle of trunk
17
omental fat pad
17
osteoblast
17
testis
16
ascending aorta
16
cerebellum
16
chorionic villus
16
fibroblast of lung
16
foreskin fibroblast
16
frontal cortex
16
layer of hippocampus
16
pancreatic beta cell
16
skeletal muscle myoblast
16
skeletal muscle tissue
16
upper lobe of left lung
15
embryonic stem cell
15
endocrine pancreas
15
neutrophil
15
pancreatic alpha cell
15
retinal pigment epithelial cell
14
Peyer's patch
14
cardiac muscle cell
14
endothelial cell of hepatic sinusoid
14
mammary gland epithelial cell
14
prostate gland
14
putamen
13
CD4-positive, alpha-beta T cell
13
aorta
13
fibroblast
13
keratinocyte
13
neurosphere
13
pancreatic delta cell
13
smooth muscle cell
13
temporal lobe
12
Ammon's horn
12
bronchial epithelial cell
12
fibroblast of dermis
12
left renal cortex interstitium
12
mammary epithelial cell
12
naive thymus-derived CD4-positive, alpha-beta T cell
11
breast epithelium
11
cardiomyocytes
11
esophagus muscularis mucosa
11
esophagus squamous epithelium
11
glomerular visceral epithelial cell
11
left cardiac atrium
11
left renal pelvis
11
pancreatic acinar cell
11
right renal pelvis
10
angular gyrus
10
chorion membrane
10
colonic mucosa
10
dermis blood vessel endothelial cell
10
esophagus
10
kidney tubule cell
10
neuronal stem cell
10
pancreatic stellate cell
10
right renal cortex interstitium
10
thoracic aorta
10
trophoblast
9
cingulate gyrus
9
duodenal mucosa
9
epithelial cell of prostate
9
extended pluripotent stem (EPS) cells
9
fibroblast of cardiac tissue
9
foreskin melanocyte
9
induced pluripotent stem cell
9
parathyroid adenoma
9
skeletal muscle satellite cell
9
tongue
9
vagina
8
T-cell acute lymphoblastic leukemia
8
astrocyte
8
cardiomyocytes (cardiac muscle cell)
8
endodermal cell
8
eye
8
fibroblast of breast
8
fibroblast of mammary gland
8
fibroblast of pulmonary artery
8
fibroblast of villous mesenchyme
8
globus pallidus
8
hepatic stellate cell
8
kidney glomerular epithelial cell
8
limb
8
lower leg skin
8
mesendoderm
8
myoepithelial cell of mammary gland
8
naive T cell
8
progenitor cell of endocrine pancreas
7
CD1c-positive myeloid dendritic cell
7
CD4-positive helper T cell
7
amygdala
7
choroid plexus epithelial cell
7
dendritic cell
7
hypothalamus
7
mature neutrophil
7
renal cortical epithelial cell
7
right lobe of liver
7
stomach smooth muscle
7
uterus
6
Brodmann (1909) area 46
6
T-cell
6
alternatively activated macrophage
6
anterior cingulate cortex
6
astrocyte of the cerebellum
6
astrocyte of the hippocampus
6
bipolar neuron
6
cardiac precursors (cardiac muscle cell)
6
cerebellum (Hemisphere)
6
dermis lymphatic vessel endothelial cell
6
epithelial cell of esophagus
6
erythroblast
6
gamma-delta T cell
6
gastroesophageal sphincter
6
kidney epithelial cell
6
kidney loop of Henle thin ascending limb epithelial cell
6
midbrain
6
middle frontal gyrus
6
mucosa of rectum
6
naive thymus-derived CD8-positive, alpha-beta T cell
6
neuroblastoma cell line
6
nucleus accumbens
6
occipital lobe
6
skin fibroblast
6
superior temporal gyrus
6
urinary bladder
5
cardiac fibroblast
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
Organ
1
brain
Date released
1
September, 2023
Software used
1
chicago
Lab
1
Struan F.A. Grant, CHOP
Project
1
AMP
RFA
1
AMP2
biosample_type!
cell line
month_released!
November, 2021
Showing 1 of 1 results
table-tab-icon
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Download
FileSet
DSR843RXV
released
Annotation file set
: Target gene annotation of open chromatin regions from promoter capture c of ESC (1frag and 4 frag)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP