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Schema
Citing CMDGA
Clear Filters
Annotation type
4
candidate regulatory elements
1
accessible chromatin
1
binding sites
1
chromatin state
1
histone modifications
1
target gene predictions
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
Available data
1
bed bed9
File set status
1
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
21
heart
19
stomach
18
brain
16
lung
16
muscle of arm
15
muscle of leg
15
small intestine
14
adrenal gland
14
placenta
13
common myeloid progenitor, CD34-positive
13
large intestine
13
left lung
13
muscle of back
11
right lung
11
thymus
10
hematopoietic multipotent progenitor cell
9
CD4-positive, alpha-beta memory T cell
9
liver
8
B cell
8
heart left ventricle
7
CD8-positive, alpha-beta memory T cell
7
mature neutrophil
7
spinal cord
6
adipocyte
6
adipose tissue
6
left cardiac atrium
6
mononuclear cell
6
spleen
5
CD14-positive, CD16-negative classical monocyte
5
embryonic stem cell
5
endothelial cell of umbilical vein
5
heart right ventricle
5
sigmoid colon
5
temporal lobe
5
trophoblast cell
4
CD14-positive monocyte
4
T cell
4
alternatively activated macrophage
4
angular gyrus
4
aorta
4
body of pancreas
4
caudate nucleus
4
chorionic villus
4
endocrine pancreas
4
fibroblast of lung
4
foreskin keratinocyte
4
gastrocnemius medialis
4
layer of hippocampus
4
muscle of trunk
4
neural progenitor cell
4
ovary
4
psoas muscle
4
thyroid gland
4
tibial nerve
4
transverse colon
3
CD4-positive, alpha-beta T cell
3
Peyer's patch
3
T-helper 1 cell
3
T-helper 17 cell
3
T-helper 2 cell
3
ascending aorta
3
chorion membrane
3
cingulate gyrus
3
colonic mucosa
3
coronary artery
3
duodenal mucosa
3
fibroblast of cardiac tissue
3
fibroblast of dermis
3
inflammatory macrophage
3
islet of Langerhans
3
keratinocyte
3
mammary gland epithelial cell
3
mesenchymal stem cell
3
mucosa of rectum
3
naive T cell
3
natural killer cell
3
neurosphere
3
pancreas
3
regulatory T cell
3
retina
3
right cardiac atrium
3
skeletal muscle myoblast
3
skeletal muscle tissue
3
stomach smooth muscle
3
substantia nigra
3
testis
3
thoracic aorta
3
tibial artery
3
upper lobe of left lung
2
Brodmann (1909) area 46
2
breast epithelium
2
bronchial epithelial cell
2
cerebellum
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
endodermal cell
2
epithelial cell of prostate
2
erythroblast
2
esophagus
2
esophagus muscularis mucosa
2
esophagus squamous epithelium
2
eye
2
fibroblast of breast
2
frontal cortex
2
germinal matrix
2
hepatocyte
2
limb
2
lower leg skin
2
muscle cell
2
muscle layer of colon
2
muscle layer of duodenum
2
myoepithelial cell of mammary gland
2
neutrophil
2
omental fat pad
2
parathyroid adenoma
2
prostate gland
2
rectum smooth muscle tissue
2
right atrium auricular region
2
skeletal muscle satellite cell
2
skin fibroblast
2
tongue
2
trophoblast
2
urinary bladder
2
vagina
1
Ammon's horn
1
CD1c-positive myeloid dendritic cell
1
CD34-PB
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
CD8-positive, alpha-beta T cell
1
H1-hESC
1
amnion
1
amnion mesenchymal stem cell
1
amniotic stem cell
1
arm bone
1
astrocyte
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
astrocyte of the spinal cord
1
bipolar neuron
1
brain microvascular endothelial cell
1
cardiac mesoderm primordium
1
cardiac muscle cell
1
cerebellar cortex
1
choroid plexus epithelial cell
1
ectodermal cell
1
embryonic facial prominence
1
epidermal melanocyte
1
epithelial cell of amnion
1
epithelial cell of esophagus
1
femur
1
fibroblast of gingiva
1
fibroblast of mammary gland
1
fibroblast of peridontal ligament
1
fibroblast of pulmonary artery
1
fibroblast of the aortic adventitia
1
fibroblast of the conjunctiva
1
fibroblast of villous mesenchyme
1
foreskin fibroblast
1
foreskin melanocyte
1
gastroesophageal sphincter
1
germinal center
1
globus pallidus
1
hepatic stellate cell
1
inferior parietal cortex
1
iris pigment epithelial cell
1
islet precursor cell
1
leg bone
1
luminal epithelial cell of mammary gland
1
lung microvascular endothelial cell
1
mammary epithelial cell
1
mammary stem cell
1
mature eosinophil
1
medulla oblongata
1
mesendoderm
1
mesodermal cell
1
mid-frontal lobe
1
midbrain
1
middle frontal gyrus
1
mucosa of stomach
1
neural cell
1
neuron
1
non-pigmented ciliary epithelial cell
1
occipital lobe
1
olfactory neurosphere cell line
1
osteoblast
1
pericyte cell
1
pons
1
pulmonary artery endothelial cell
1
putamen
1
regular cardiac myocyte
1
retinal pigment epithelial cell
1
right lobe of liver
1
skeletal muscle
1
skeletal muscle cell
1
skin of body
1
smooth muscle cell
1
smooth muscle cell of the brain vasculature
1
stromal cell of bone marrow
1
subcutaneous abdominal adipose tissue
1
subcutaneous adipose tissue
Organ
1
penis
Life stage
1
newborn
Date released
1
September, 2022
Software used
1
chromhmm
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
biosample_type!
cell line
organ_slims!
kidney
Showing 1 of 1 results
table-tab-icon
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Download
FileSet
DSR377XRZ
released
Annotation file set
: Chromatin states for BSS00368 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP