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Schema
Citing CMDGA
Clear Filters
Annotation type
1252
candidate regulatory elements
910
target gene predictions
731
accessible chromatin
704
chromatin state
657
gene expression
392
histone modifications
173
binding sites
157
differential activity
154
eQTL
128
variant allelic effects
65
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Annotation Category
5
Genetic variant effects
Annotation type Category
5
ChIP-seq
Available data
3
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
2
monocyte
2
neutrophil
1
naive thymus-derived CD4-positive, alpha-beta T cell
Life stage
5
adult
Date released
5
May, 2021
Software used
5
limix
5
macs
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
biosample_type!
cell line
organ_slims!
limb
Showing 5 of 5 results
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Download
FileSet
DSR502WRJ
released
Annotation file set
: histone quantitative trait loci (hQTL) from H3K4me1 ChIP-seq of BLUEPRINT epigenome project of human immune cell types (naive CD4+ T cells) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR804HBZ
released
Annotation file set
: histone quantitative trait loci (hQTL) from H3K4me1 ChIP-seq of BLUEPRINT epigenome project of human immune cell types (CD16+ neutrophils) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR650UBZ
released
Annotation file set
: histone quantitative trait loci (hQTL) from H3K4me1 ChIP-seq of BLUEPRINT epigenome project of human immune cell types (CD14+ monocytes) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR676ZHI
released
Annotation file set
: histone quantitative trait loci (hQTL) from H3K27ac ChIP-seq of BLUEPRINT epigenome project of human immune cell types (CD16+ neutrophils) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR930EID
released
Annotation file set
: histone quantitative trait loci (hQTL) from H3K27ac ChIP-seq of BLUEPRINT epigenome project of human immune cell types (CD14+ monocytes) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP