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Schema
Citing CMDGA
Clear Filters
Annotation type
21
candidate regulatory elements
17
target gene predictions
15
chromatin state
9
histone modifications
8
eQTL
6
binding sites
5
gene expression
4
accessible chromatin
3
Fine-mapped variants
1
caQTL
1
differential activity
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
ATAC-seq
Available data
4
bed bed3+
3
bigWig
File set status
4
released
Genome assembly (visualization)
4
hg19
3
GRCh38
Organism
4
Homo sapiens
Biosample type
primary cell
3
tissue
1
cell line
Biosample term
3
liver
1
HepG2
Organ
48
eye
43
epithelium
25
pancreas
17
connective tissue
17
kidney
15
heart
14
limb
13
brain
8
blood vessel
8
bone element
8
skeleton
8
vasculature
6
adipose tissue
6
artery
4
liver
4
musculature of body
3
ureter
2
nerve
1
spleen
Life stage
2
adult
1
embryonic
Date released
June, 2020
1
February, 2021
1
May, 2022
1
November, 2019
1
September, 2018
Software used
4
macs
Lab
3
AMP-T2D consortium
1
Karen Mohlke, UNC
Project
4
AMP
RFA
4
AMP
biosample_type!
primary cell
month_released!
June, 2020
Showing 4 of 4 results
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Download
FileSet
DSR303OZW
released
Annotation file set
: Accessible chromatin annotation(consensus peaks) of liver tissue from pilot study(AJHG2021) in Mohlke Lab
Lab:
Karen Mohlke, UNC
Project:
AMP
FileSet
DSR848MAN
released
Annotation file set
: Accessible chromatin of E-MTAB-7543 - ATAC-seq of HepG2 cells
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR815GWW
released
Annotation file set
: Accessible chromatin annotation of embryonic liver
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR027RWS
released
Annotation file set
: ATAC-seq sites in right lobe of liver for 1 sample from ENCODE
Lab:
AMP-T2D consortium
Project:
AMP