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Schema
Citing CMDGA
Clear Filters
Annotation type
29
candidate regulatory elements
18
chromatin state
16
target gene predictions
3
histone modifications
2
accessible chromatin
2
eQTL
1
binding sites
1
gene expression
1
variant allelic effects
Annotation Category
3
Genetic variant effects
Annotation type Category
2
RNA-seq
1
DNase-seq
Available data
1
bed bed3+
File set status
3
released
Genome assembly (visualization)
2
GRCh38
1
hg19
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
4
putamen
3
brain
3
caudate nucleus
3
frontal cortex
3
substantia nigra
2
amygdala
2
anterior cingulate cortex
2
cerebellum
2
cerebellum (Hemisphere)
2
hypothalamus
2
nucleus accumbens
1
Ammon's horn
1
cerebellar hemisphere
1
dorsolateral prefrontal cortex
1
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
1
globus pallidus
1
layer of hippocampus
1
medulla oblongata
1
midbrain
1
middle frontal gyrus
1
pituitary gland
1
pons
Organ
3
brain
Date released
2
January, 2022
1
May, 2020
Software used
2
qTLtools
1
deltasvm
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
biosample_type!
primary cell
Showing 3 of 3 results
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FileSet
DSR191XXQ
released
Annotation file set
: brain naive eQTL of studay ROSMAP from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR999BSN
released
Annotation file set
: brain eQTL of studay BrainSeq from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR154FEP
released
Annotation file set
: Genetic variants with deltaSVM predictions in brain DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP