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Schema
Citing CMDGA
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Annotation type
29
candidate regulatory elements
21
chromatin state
17
target gene predictions
15
eQTL
12
gene expression
8
accessible chromatin
4
histone modifications
3
binding sites
2
Fine-mapped variants
2
sQTL
2
variant allelic effects
2
variant to gene
Annotation Category
2
Genetic variant effects
Annotation type Category
1
ATAC-seq
1
DNase-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
2
muscle of leg
2
MIN6
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
coronary artery
2
heart
2
heart left ventricle
2
right atrium auricular region
2
tibial artery
2
tibial nerve
1
hindlimb muscle
1
left kidney
1
omental fat pad
1
Adipose SGBS cell line (adipocyte)
1
EndoC_BH1
1
Preadipose SGBS cell line (adipocyte)
1
adipose tissue
1
ascending aorta
1
body of pancreas
1
brain
1
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
caudate nucleus
1
cerebellum (Hemisphere)
1
frontal cortex
1
globus pallidus
1
glomerular visceral epithelial cell
1
heart right ventricle
1
islet of Langerhans
1
kidney
1
left cardiac atrium
1
left renal cortex interstitium
1
left renal pelvis
1
medulla oblongata
1
midbrain
1
middle frontal gyrus
1
muscle of arm
1
occipital lobe
1
pancreas
1
pons
1
purified protein and synthetic DNA oligo binding assay
1
putamen
1
renal cortex interstitium
1
renal pelvis
1
retina
1
right kidney
1
right renal cortex interstitium
1
right renal pelvis
1
subcutaneous adipose tissue
1
superior temporal gyrus
1
thoracic aorta
Organ
1
brain
1
pancreas
Life stage
1
adult
Date released
2
May, 2020
Software used
2
deltasvm
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
biosample_type!
primary cell
Showing 2 of 2 results
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Download
FileSet
DSR159BKA
released
Annotation file set
: Genetic variants with deltaSVM predictions in pancreatic islet ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR154FEP
released
Annotation file set
: Genetic variants with deltaSVM predictions in brain DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP