Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
6
accessible chromatin
5
chromatin state
3
binding sites
2
histone modifications
1
target gene predictions
Annotation Category
2
cis-regulatory elements
1
Target gene links
Annotation type Category
2
ChIP-seq
1
pCHi-C
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
2
in vitro differentiated cells
1
cell line
Biosample term
55
HeLa-S3
40
H1-hESC
24
K562
22
stomach
21
heart
20
A549
20
neural progenitor cell
19
HFFc6
19
brain
17
adrenal gland
17
lung
17
placenta
17
small intestine
16
kidney
16
muscle of arm
15
large intestine
15
thymus
14
muscle of leg
13
left lung
13
muscle of back
12
liver
11
breast cancer cell
11
hematopoietic multipotent progenitor cell
11
right lung
10
pituitary stalk
10
right kidney
9
GM12878
9
gastric cancer cell
9
left kidney
9
renal cortex interstitium
9
renal pelvis
9
spinal cord
8
H9
8
HepG2
8
MCF-7
8
Rhabdomyosarcoma
8
adipose tissue
8
heart left ventricle
8
lymphocyte
8
neuroblastoma cell
8
psoas muscle
8
spleen
7
B-lymphoblastoid cell line
7
adipocyte
7
diffuse intrinsic pontine glioma
7
esophageal adenocarcinoma
7
sigmoid colon
6
Chondroid Chordoma
6
dendritic cell
6
hESC cell
6
liposarcoma
6
neuroblastoma cell line
6
ovary
6
pancreas
6
squamous cell lung carcinoma
5
CyT49
5
T-cell acute lymphoblastic leukemia
5
body of pancreas
5
gastrocnemius medialis
5
heart right ventricle
5
melanoma cell
5
mesenchymal stem cell
5
muscle of trunk
5
osteosarcoma
5
thyroid gland
5
transverse colon
4
HUES8
4
Jurkat
4
aorta
4
caudate nucleus
4
chorionic villus
4
endocrine pancreas
4
iPSC derived cell line
4
layer of hippocampus
4
mesendoderm
4
prostate gland
4
retina
4
rhabdomyosarcoma cell
4
skeletal muscle tissue
4
testis
4
upper lobe of left lung
3
22Rv1
3
Ewing sarcoma
3
GM18507
3
GM19238
3
GM19239
3
GM19240
3
H7-hESC
3
HAP-1
3
HCT116
3
HT-29
3
IMR-90
3
KARPAS-422 cell
3
LoVo cell
3
MM.1S
3
NAMALWA cell
3
OCI-LY7
3
PC-9
3
Peyer's patch
3
SK-N-DZ
3
SK-N-SH
3
U937
3
breast epithelium
3
cardiac muscle cell
3
cardiomyocytes (cardiac muscle cell)
3
cerebellum
3
chorion membrane
3
colonic mucosa
3
coronary artery
3
diffuse large B-cell lymphoma
3
embryonic stem cell
3
endodermal cell
3
endometrium adenocarcinoma
3
esophageal squamous cell carcinoma
3
esophagus
3
glioblastoma cell
3
glioma cell
3
immortal human breast epithelial cell line cell
3
lymphoblast
3
lymphoblastoid cell line
3
neuronal stem cell
3
pancreatic ductal adenocarcinoma
3
substantia nigra
3
temporal lobe
3
tibial nerve
3
trophoblast
2
A673
2
AG04449 cell
2
AG04450 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803 cell
2
Ammon's horn
2
B cell
2
BE(2)-C
2
BJ cell
2
BJAB cell
2
Brodmann (1909) area 46
2
CMK
2
COLO205
2
Caco-2 cell
2
EndoC_BH1
2
GM06990
2
GM12864
2
GM12865
2
GM12875
2
GM12891
2
GM12892
2
GM18505
2
GM19099
2
GM19193
2
GM23248
2
HCT-116 cell
2
HEK293
2
HK-2 cell
2
HL-60
2
HS-SY-2 cell
2
HuH-7
2
LHCN-M2
2
LNCAP
2
LNCaP clone FGC
2
MCF 10A cell
2
MDA-MB-231 cell
2
MG63
2
Mantle cell lymphoma
2
NCCIT cell
2
NT2-D1 cell
2
OCI-LY1
2
PC-3
2
Panc1
2
RPMI8226
2
RS4-11 cell
2
RWPE1
2
Rh-4 cell
2
SK-MEL-5
2
SK-N-MC
2
SW480
2
T47D
2
THP-1
2
VCaP cell
2
WERI-Rb-1
2
acute myeloid leukemia
2
angular gyrus
2
ascending aorta
2
bipolar neuron
2
chronic lymphocytic leukemia
2
cingulate gyrus
2
colon adenocarcinoma
2
colon carcinoma
2
duodenal mucosa
2
endometriosis
2
epithelial ovarian cancer cell
2
esophageal carcinoma
2
esophagus muscularis mucosa
2
esophagus squamous epithelium
2
eye
2
fibroblast
2
fibroblast cell line
2
fibroblast of cardiac tissue
2
frontal cortex
Date released
2
February, 2021
1
March, 2020
Software used
2
macs
1
nospecificsoft_customcode
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
biosample_type!
primary cell
Showing 3 of 3 results
table-tab-icon
matrix-icon
Download
FileSet
DSR927IPU
released
Annotation file set
: Histone modifications annotation for Pluripotent stem cell Expanded_potential_stem_cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR134CON
released
Annotation file set
: Histone modifications annotation for Pluripotent stem cell Embryonic_Stem_Cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR929DUM
released
Annotation file set
: A target gene prediction annotation in Human Human ES Cells of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP