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Schema
Citing CMDGA
Clear Filters
Annotation type
1
candidate regulatory elements
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
1
DNase-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
cell line
Biosample term
21
stomach
18
heart
17
lung
17
muscle of arm
15
kidney
15
muscle of back
14
adrenal gland
14
large intestine
14
muscle of leg
14
small intestine
13
brain
13
left lung
12
placenta
11
renal cortex interstitium
11
right lung
10
renal pelvis
10
right kidney
9
left kidney
9
spleen
9
thymus
7
spinal cord
6
H9
6
heart left ventricle
6
liver
5
sigmoid colon
5
subcutaneous abdominal adipose tissue
4
MCF-7
4
Peyer's patch
4
WI38
4
body of pancreas
4
chorionic villus
4
esophagus squamous epithelium
4
gastrocnemius medialis
4
gastroesophageal sphincter
4
left renal cortex interstitium
4
left renal pelvis
4
lower leg skin
4
muscle of trunk
4
ovary
4
right renal pelvis
4
testis
4
thyroid gland
4
transverse colon
4
upper lobe of left lung
3
A549
3
MCF 10A
3
breast epithelium
3
endocrine pancreas
3
esophagus muscularis mucosa
3
heart right ventricle
3
layer of hippocampus
3
omental fat pad
3
pancreas
3
parathyroid adenoma
3
psoas muscle
3
retina
3
right renal cortex interstitium
3
skeletal muscle tissue
3
substantia nigra
3
suprapubic skin
3
temporal lobe
3
tibial nerve
2
22Rv1
2
AG10803
2
HEK293
2
HeLa-S3
2
LNCAP
2
NAMALWA
2
SK-N-DZ
2
SK-N-SH
2
angular gyrus
2
aorta
2
ascending aorta
2
caudate nucleus
2
chorion
2
cingulate gyrus
2
colonic mucosa
2
duodenal mucosa
2
esophagus
2
eye
2
middle frontal area 46
2
mucosa of rectum
2
muscle layer of colon
2
muscle layer of duodenum
2
placental basal plate
2
prostate gland
2
stomach smooth muscle
2
subcutaneous adipose tissue
2
thoracic aorta
2
tongue
2
trophoblast
2
uterus
2
vagina
1
A172
1
A673
1
ACC112
1
ACHN
1
AG04449
1
AG04450
1
AG09309
1
AG09319
1
Ammon's horn
1
BE2C
1
BJ
1
C4-2B
1
CMK
1
Caco-2
1
Caki2
1
D721Med
1
DND-41
1
DOHH2
1
Daoy
1
EH
1
EL
1
ELF-1
1
ELR
1
G401
1
GM04503
1
GM04504
1
GM06990
1
GM08714
1
GM10248
1
GM10266
1
GM12801
1
GM12864
1
GM12865
1
GM12873
1
GM12874
1
GM12875
1
GM12878
1
GM13976
1
GM13977
1
GM20000
1
GM23248
1
GM23338
1
H1
1
H4
1
H54
1
H7
1
HAP-1
1
HCEC 1CT
1
HCT116
1
HFF-Myc
1
HK-2
1
HL-60
1
HS-27A
1
HS-5
1
HT-29
1
HT1080
1
HUES48
1
HUES6
1
HUES64
1
HepG2
1
IMR-90
1
Ishikawa
1
Jurkat, Clone E6-1
1
K562
1
KBM-7
1
KMS-11
1
KOPT-K1
1
Karpas-422
1
L1-S8
1
LHCN-M2
1
LNCaP clone FGC
1
LoVo
1
Loucy
1
M059J
1
MG63
1
MM.1S
1
NB4
1
NCI-H226
1
NCI-H460
1
NCI-H929
1
NT2/D1
1
OCI-LY1
1
OCI-LY3
1
OCI-LY7
1
PC-3
1
PC-9
1
Panc1
1
RCC
1
RCC 7860
1
RKO
1
RPMI7951
1
RPMI8226
1
RWPE1
1
RWPE2
1
SJCRH30
1
SJSA1
1
SK-MEL-5
1
SK-N-MC
1
SU-DHL-6
1
SW480
1
T47D
1
UCSF-4
1
VCaP
1
WERI-Rb-1
1
adipose tissue
1
amnion
1
cerebellar cortex
Organ
1
blood
1
bodily fluid
Life stage
1
adult
Date released
1
February, 2021
Software used
12
r
8
chromhmm
3
macs
1
abc
1
encode-ccres
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
biosample_type!
primary cell
in vitro differentiated cells
Showing 1 of 1 results
table-tab-icon
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Download
FileSet
DSR396CCK
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE K562
Lab:
AMP-T2D consortium
Project:
AMP