Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
4
candidate regulatory elements
3
chromatin state
2
target gene predictions
1
histone modifications
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
ChIP-seq
4
DNase-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
27
large intestine
10
sigmoid colon
8
transverse colon
7
K562
4
colonic mucosa
4
mucosa of rectum
4
muscle layer of colon
2
CMK
2
GM06990
2
GM12875
2
GM12878
2
HAP-1
2
HCT116
2
HL-60
2
HT-29
2
KBM-7
2
NAMALWA
2
NAMALWA cell
2
NB4
2
OCI-LY7
2
RPMI8226
2
SW480
1
Caco-2
1
GM12873
1
GM12874
1
GM12891
1
GM12892
1
GM19238
1
GM19239
1
GM19240
1
Karpas-422
1
LoVo
1
RKO
1
colon epithelial cell
1
rectal smooth muscle tissue
1
rectum smooth muscle tissue
Organ
4
intestine
4
large intestine
0
blood
Life stage
4
adult
Date released
2
February, 2021
2
September, 2022
Software used
2
encode-ccres
2
r
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
biosample_type!
primary cell
Showing 4 of 4 results
table-tab-icon
matrix-icon
Download
FileSet
DSR809VPE
released
Annotation file set
: Candidate regulatory elements for BSS00228 colonic mucosa from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR394QSN
released
Annotation file set
: Candidate regulatory elements for BSS00227 colonic mucosa from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR389KXN
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE colonic mucosa
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR504AUN
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE colonic mucosa
Lab:
AMP-T2D consortium
Project:
AMP