Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
1
target gene predictions
Annotation Category
1
Target gene links
Annotation type Category
1
Capture-C
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
stem cell
Biosample term
49
CD8-positive, alpha-beta T cell
44
A549
41
common myeloid progenitor, CD34-positive
33
B cell
33
hematopoietic multipotent progenitor cell
31
monocyte
27
CD14-positive monocyte
24
neural progenitor cell
23
CD4-positive, alpha-beta memory T cell
23
adipocyte
23
regulatory T cell
22
EndoC_BH1
22
endothelial cell
21
MCF-7
21
epithelial cell of proximal tubule
20
breast cancer cell
19
K562
19
glomerular endothelial cell
19
natural killer cell
19
pancreatic ductal cell
18
T-helper 1 cell
18
embryonic stem cell
18
foreskin keratinocyte
18
hepatocyte
17
T-helper 17 cell
17
foreskin fibroblast
17
trophoblast cell
16
H1-hESC
16
induced pluripotent stem cell
15
CD8-positive, alpha-beta memory T cell
15
keratinocyte
15
mesenchymal stem cell
14
endothelial cell of umbilical vein
14
mononuclear cell
14
pancreatic alpha cell
13
CD4-positive, alpha-beta T cell
13
cardiac muscle cell
13
pancreatic beta cell
13
pancreatic delta cell
13
skeletal muscle myoblast
12
T cell
12
T-helper 2 cell
12
fibroblast of lung
12
mammary epithelial cell
12
neuroblastoma cell
12
neutrophil
12
osteoblast
12
retinal pigment epithelial cell
11
HepG2
11
macrophage
11
naive thymus-derived CD4-positive, alpha-beta T cell
10
HeLa-S3
10
Rhabdomyosarcoma
10
bronchial epithelial cell
10
fibroblast of cardiac tissue
10
gastric cancer cell
10
mammary gland epithelial cell
10
neuronal stem cell
10
pancreatic acinar cell
10
progenitor cell of endocrine pancreas
10
smooth muscle cell
9
GM12878
9
H9
9
cardiomyocytes
9
diffuse intrinsic pontine glioma
9
epithelial cell of prostate
9
fibroblast of dermis
9
glomerular visceral epithelial cell
9
liposarcoma
9
neurosphere
8
22Rv1
8
B-lymphoblastoid cell line
8
HEK293
8
IMR-90
8
fibroblast
8
fibroblast cell line
8
pituitary stalk
7
GM06990
7
GM12864
7
GM12865
7
HAP-1
7
HL-60
7
HT-29
7
Jurkat
7
KARPAS-422 cell
7
cardiomyocytes (cardiac muscle cell)
7
esophageal adenocarcinoma
7
extended pluripotent stem (EPS) cells
7
mature neutrophil
7
mesendoderm
6
AG04449 cell
6
AG04450 cell
6
AG09309 cell
6
AG09319 cell
6
AG10803 cell
6
BE(2)-C
6
BJ cell
6
CD1c-positive myeloid dendritic cell
6
CMK
6
Caco-2 cell
6
Chondroid Chordoma
6
GM12875
6
GM19240
6
GM23248
6
LHCN-M2
6
LNCAP
6
LoVo cell
6
MG63
6
MM.1S
6
NAMALWA cell
6
SK-N-MC
6
cardiac precursors (cardiac muscle cell)
6
chondrocyte
6
choroid plexus epithelial cell
6
endometrium adenocarcinoma
6
fibroblast of pulmonary artery
6
hESC cell
6
immortal human breast epithelial cell line cell
6
naive thymus-derived CD8-positive, alpha-beta T cell
6
neuroblastoma cell line
6
pancreatic stellate cell
6
skeletal muscle satellite cell
6
skin fibroblast
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
B Cell
5
CD14-positive, CD16-negative classical monocyte
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Daoy
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Ewing sarcoma
5
Fibroblast
5
GM08714
5
GM10248
5
GM10266
5
GM12891
5
GM12892
5
GM19238
5
GM19239
5
Glomerular Capillary Endothelial Cell
5
H7-hESC
5
HCT-116 cell
5
HUES6
5
HuH-7
5
Intercalated Cell Type A
5
Intercalated Cell Type B
5
KBM-7
5
LNCaP clone FGC
5
Lymphatic Endothelial Cell
5
Medullary Thick Ascending Limb Cell
5
Monocyte
5
Myofibroblast
5
Natural Killer T Cell
5
Non-Classical Monocyte
5
OCI-LY1
5
OCI-LY7
5
PC-9
5
SGBS preadipocytes
5
SJSA1
5
SK-N-DZ
5
SK-N-SH
5
SW480
5
WERI-Rb-1
5
WI38
5
acute myeloid leukemia
5
dermis blood vessel endothelial cell
5
endodermal cell
5
foreskin melanocyte
5
hepatic stellate cell
5
kidney glomerular epithelial cell
5
kidney interstitial cell
5
kidney loop of Henle thin ascending limb epithelial cell
5
kidney tubule cell
5
lymphoblastoid cell line
5
memory B cell
5
myoepithelial cell of mammary gland
5
neural cell
5
osteosarcoma
Organ
1
brain
Date released
1
September, 2023
Software used
1
chicago
Lab
1
Struan F.A. Grant, CHOP
Project
1
AMP
RFA
1
AMP2
biosample_type!
tissue
assembly!
GRCh38
Showing 1 of 1 results
table-tab-icon
matrix-icon
Download
FileSet
DSR843RXV
released
Annotation file set
: Target gene annotation of open chromatin regions from promoter capture c of ESC (1frag and 4 frag)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP