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Schema
Citing CMDGA
Clear Filters
Annotation type
1
binding sites
1
candidate regulatory elements
1
histone modifications
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
1
DNase-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
cell line
Biosample term
20
breast cancer cell
15
epithelial cell of proximal tubule
14
common myeloid progenitor, CD34-positive
13
glomerular endothelial cell
12
neuroblastoma cell
11
cardiomyocytes
11
gastric cancer cell
11
hematopoietic multipotent progenitor cell
10
diffuse intrinsic pontine glioma
Rhabdomyosarcoma
9
cardiac muscle cell
9
foreskin fibroblast
9
foreskin keratinocyte
9
induced pluripotent stem cell
9
liposarcoma
9
mammary epithelial cell
8
CD4-positive, alpha-beta T cell
8
MCF-7
8
T-cell acute lymphoblastic leukemia
8
esophageal adenocarcinoma
8
keratinocyte
8
neuroblastoma cell line
8
neuronal stem cell
7
B cell
7
B-lymphoblastoid cell line
7
CD8-positive, alpha-beta T cell
7
endothelial cell
7
fibroblast cell line
7
hESC cell
7
kidney loop of Henle thin ascending limb epithelial cell
7
melanoma
7
osteoblast
6
Chondroid Chordoma
6
H9
6
acute myeloid leukemia
6
bronchial epithelial cell
6
glioblastoma multiforme cancer stem cell
6
hepatocyte
6
kidney interstitial cell
6
natural killer cell
6
neural progenitor cell
6
osteosarcoma
6
prostate cancer cell line
6
squamous cell lung carcinoma
5
A549
5
CD4-positive, alpha-beta memory T cell
5
Ewing sarcoma
5
adipocyte
5
diffuse large B-cell lymphoma
5
embryonic stem cell
5
endothelial cell of umbilical vein
5
esophageal squamous cell carcinoma
5
foreskin melanocyte
5
glomerular visceral epithelial cell
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
lymphoblastoid cell line
5
melanoma cell
5
mesodermal cell
5
peripheral blood mononuclear cell
5
synovial sarcoma cell
5
triple-negative breast cancer
5
trophoblast cell
4
22Rv1
4
CD14-positive monocyte
4
HEK293
4
HS-SY-2 cell
4
HepG2
4
Jurkat
4
LNCAP
4
Mantle cell lymphoma
4
RS4-11 cell
4
Rh-4 cell
4
T-cell
4
Th1 cell
4
Tumor-derived cell line
4
WI38
4
colon adenocarcinoma
4
dermal fibroblast
4
dermis blood vessel endothelial cell
4
endodermal cell
4
epithelial cell of prostate
4
erythroid progenitor cell
4
glioblastoma cell
4
glioma cell
4
hepatic stellate cell
4
immortal neural cell line cell
4
mesangial cell
4
mesenchymal stem cell
4
nephron progenitor
4
neurosphere
4
pancreatic cell line
4
pancreatic ductal cell
4
rhabdomyosarcoma cell
4
skeletal muscle myoblast
4
smooth muscle cell of the coronary artery
4
tracheal epithelial cell
3
B-lymphocyte
3
CD1c-positive myeloid dendritic cell
3
CMK
3
COLO-320 cell
3
COLO205
3
GM06990
3
GM12864
3
GM12865
3
GM12873
3
GM12875
3
GM12878
3
GM23248
3
HAP-1
3
HL-60
3
HT-29
3
IMR-90
3
Ishikawa
3
K562
3
LHCN-M2
3
MCF 10A
3
MG63
3
MM.1S
3
OCI-LY1
3
OCI-LY7
3
PC-3
3
PC-9
3
RKO
3
RPMI8226
3
RWPE1
3
S-shaped body
3
SK-N-DZ
3
SK-N-MC
3
SW480
3
T-helper 1 cell
3
WERI-Rb-1
3
adult endothelial progenitor cell
3
cardiac fibroblast
3
cardiac precursors (cardiac muscle cell)
3
choroid plexus epithelial cell
3
chronic lymphocytic leukemia cell
3
dermis microvascular lymphatic vessel endothelial cell
3
epithelial ovarian cancer cell
3
fibroblast
3
fibroblast of cardiac tissue
3
fibroblast of lung
3
fibroblast of mammary gland
3
fibroblast of pulmonary artery
3
fibroblast of villous mesenchyme
3
hematopoietic cell
3
kidney cell
3
kidney collecting duct intercalated cell
3
kidney connecting tubule epithelial cell
3
kidney cortex collecting duct intercalated cell
3
kidney distal convoluted tubule epithelial cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney resident macrophage
3
leukemic stem cell
3
lung fibroblast cell line
3
lymphoblast
3
mammary gland epithelial cell
3
mesendoderm
3
meso-epithelial cell
3
metastatic melanoma
3
mononuclear cell of bone marrow
3
myotube
3
naive thymus-derived CD4-positive, alpha-beta T cell
3
pancreatic ductal adenocarcinoma
3
plasma cell
3
pre-B acute lymphoblastic leukemia cell
3
preadipocyte
3
prostate derived cell line
3
pulmonary artery endothelial cell
3
regulatory T cell
2
143B
2
501A
2
697 cell
2
769-P cell
2
786-O cell
2
A-1847 cell
2
A-375 cell
2
A-498 cell
2
A-673 cell
2
AG04449 cell
2
AG04450 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803
2
AG10803 cell
2
AGS cell
2
ALL-SIL cell
2
Adipose stromal cell
2
AsPC-1 cell
2
B-cell lymphoma cell
2
BCBL-1 cell
2
BE(2)-C
2
BEAS-2B cell
2
BG03
2
BICR 31
2
BJ cell
2
BT-474 cell
2
BT-549 cell
2
Burkitt's lymphoma
Organ
3
blood
3
bodily fluid
Life stage
1
adult
Date released
18
September, 2022
16
February, 2024
3
February, 2021
1
August, 2017
1
June, 2020
1
May, 2021
1
October, 2022
Software used
2
macs
1
encode-ccres
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
biosample_type!
tissue
biosample_term_name!
Rhabdomyosarcoma
Showing 3 of 3 results
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Download
FileSet
DSR396CCK
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE K562
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR855GPE
released
Annotation file set
: Histone modifications annotation for Blood K-562 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR044RQC
released
Annotation file set
: Binding sites annotation for Blood K-562 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP