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Schema
Citing CMDGA
Clear Filters
Annotation type
7
histone modifications
5
binding sites
5
target gene predictions
4
candidate regulatory elements
4
chromatin state
3
accessible chromatin
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
ChIP-seq
Available data
3
bed bed9
1
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
3
GRCh38
Organism
4
Homo sapiens
Biosample type
10
tissue
4
cell line
2
primary cell
1
in vitro differentiated cells
Biosample term
2
HepG2
1
HuH-7
1
HuH-7.5
Disease term
3
hepatocellular carcinoma
Organ
27
bodily fluid
25
blood
23
lung
14
skin of body
11
brain
10
bone element
10
embryo
9
prostate gland
8
lymph node
7
kidney
7
mammary gland
4
intestine
4
large intestine
4
liver
4
penis
3
connective tissue
3
musculature of body
3
pancreas
3
uterus
1
epithelium
1
extraembryonic component
1
eye
1
gonad
1
limb
1
lymphoid tissue
1
mouth
1
placenta
1
testis
Life stage
2
adult
1
child
Date released
3
September, 2022
1
August, 2017
Software used
4
chromhmm
Lab
3
AMP-T2D consortium
1
Stephen Parker, UMich
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
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Download
FileSet
DSR681QPX
released
Annotation file set
: Chromatin states for BSS00719 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR425WPB
released
Annotation file set
: Chromatin states for BSS00718 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR533TVB
released
Annotation file set
: Chromatin states for BSS00558 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR035696
released
Annotation file set
: ChromHMM 13-state model for Hepatocellular Carcinoma Cell Line
Lab:
Stephen Parker, UMich
Project:
AMP