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Schema
Citing CMDGA
Clear Filters
Annotation type
23
target gene predictions
7
candidate regulatory elements
7
chromatin state
2
binding sites
1
accessible chromatin
1
histone modifications
Annotation Category
8
cis-regulatory elements
Annotation type Category
8
ChIP-seq
Available data
6
bed bed9
2
bed bed3+
File set status
8
released
Genome assembly (visualization)
8
hg19
6
GRCh38
Organism
8
Homo sapiens
Biosample type
8
cell line
Biosample term
19
A549
11
breast cancer cell
9
gastric cancer cell
8
K562
8
Rhabdomyosarcoma
8
neuroblastoma cell
7
HepG2
7
MCF-7
6
B-lymphoblastoid cell line
6
diffuse intrinsic pontine glioma
6
liposarcoma
6
squamous cell lung carcinoma
5
Chondroid Chordoma
5
esophageal adenocarcinoma
5
hESC cell
5
melanoma cell
4
osteosarcoma
3
22Rv1
3
Ewing sarcoma
3
GM12878
3
HeLa-S3
3
KARPAS-422 cell
3
NAMALWA cell
3
SK-N-DZ
3
endometrium adenocarcinoma
3
esophageal squamous cell carcinoma
3
glioblastoma cell
3
glioma cell
3
immortal human breast epithelial cell line cell
3
lymphoblast
3
lymphoblastoid cell line
2
AG04449 cell
2
AG04450 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803 cell
2
BE(2)-C
2
BJ cell
2
CMK
2
COLO205
2
Caco-2 cell
2
ESC derived cell line
2
GM06990
2
GM12864
2
GM12865
2
GM12875
2
GM12891
2
GM12892
2
GM18507
2
GM19238
2
GM19239
2
GM19240
2
GM23248
2
H1-hESC
2
H7-hESC
2
HAP-1
2
HEK293
2
HK-2 cell
2
HL-60
2
HS-SY-2 cell
2
HT-29
2
HuH-7
2
IMR-90
2
JVM-2 cell
2
Jurkat
2
LHCN-M2
2
LNCaP clone FGC
2
LoVo cell
2
MG63
2
MM.1S
2
Mantle cell lymphoma
2
NT2-D1 cell
2
OCI-LY1
2
OCI-LY7
2
PC-3
2
PC-9
2
RPMI8226
2
RS4-11 cell
2
RWPE1
2
Rh-4 cell
2
SK-MEL-5
2
SK-N-MC
2
SK-N-SH
2
SW480
2
T47D
2
U-266 cell
2
VCaP cell
2
WERI-Rb-1
2
Z-138
2
acute myeloid leukemia
2
cardiac muscle cell
2
diffuse large B-cell lymphoma
2
epithelial ovarian cancer cell
2
esophageal carcinoma
2
fibroblast of cardiac tissue
2
glioblastoma multiforme cancer stem cell
2
hematopoietic cell
2
immortal foreskin-derived fibroblast cell line cell
2
immortal neural cell line cell
2
lymphocyte
2
metastatic melanoma
2
multiple myeloma cell line
2
pancreatic cell line
2
renal cell carcinoma
2
synovial sarcoma cell
triple-negative breast cancer
2
umbilical cord mesenchymal stem cell line cell
2
urothelium cell line
1
143B
1
501A
1
5637
1
697 cell
1
769-P cell
1
76NF2V cell
1
786-O cell
1
8988T
1
A-1847 cell
1
A-375 cell
1
A-498 cell
1
A-673 cell
1
A172
1
A673
1
ACC112
1
ACHN
1
AG08395 cell
1
AG08396 cell
1
AG08470 cell
1
AG20443
1
AGS cell
1
ALL-SIL cell
1
ARH-77 cell
1
AU565 cell
1
AsPC-1 cell
1
B-lymphocyte
1
BCBL-1 cell
1
BEAS-2B cell
1
BG03
1
BGC-823 cell
1
BHY cell
1
BL-2 cell
1
BT-474 cell
1
BT-549 cell
1
Barrett's esophagus
1
BxPC-3 cell
1
C4-2B
1
C666-1 cell
1
CA46 cell
1
CAL-33 cell
1
CAL-51 cell
1
CCRF-CEM cell
1
CFPAC-1 cell
1
CHL-1 cell
1
CHP-134 cell
1
CHP-212 cell
1
COLO 679 cell
1
COLO 741 cell
1
COLO-320 cell
1
COLO829
1
COR-L311 cell
1
CTV-1 cell
1
CWRU1
1
CaSki cell
1
Caki-1 cell
1
Caki2
1
Calu-1 cell
1
Calu-3 cell
1
Capan-1 cell
1
Capan-2 cell
1
CyT49
1
D283 Med cell
1
D341 Med cell
1
DG-75 cell
1
DK cell
1
DLD-1 cell
1
DMS 114 cell
1
DMS 53 cell
1
DMS 79 cell
1
DND-41
1
DND-41 cell
1
DOHH-2 cell
1
DOHH2
1
DU 145 cell
1
Daoy
1
Daudi
1
Detroit562
1
EBC-1
1
EH
1
EJM cell
1
EL
1
ELF-1
1
ELR
1
EOL-1 cell
1
ES-I3
1
EndoC_BH1
1
FLO-1 cell
1
FU97 cell
1
FaDu cell
1
G-401 cell
1
G401
1
GM03348
Disease term
6
Philadelphia-positive myelogenous leukemia
Organ
8
blood
8
bodily fluid
Life stage
6
adult
Date released
6
September, 2022
1
August, 2017
1
February, 2021
Software used
7
chromhmm
1
macs
Lab
7
AMP-T2D consortium
1
Stephen Parker, UMich
Project
8
AMP
RFA
8
AMP
biosample_term_name!
triple-negative breast cancer
Showing 8 of 8 results
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Download
FileSet
DSR339UZM
released
Annotation file set
: Chromatin states for BSS01059 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR188RKL
released
Annotation file set
: Chromatin states for BSS01057 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR776FEP
released
Annotation file set
: Chromatin states for BSS01056 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR252FIU
released
Annotation file set
: Chromatin states for BSS01039 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR680EDW
released
Annotation file set
: Chromatin states for BSS01038 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR867LQE
released
Annotation file set
: Chromatin states for BSS00762 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR855GPE
released
Annotation file set
: Histone modifications annotation for Blood K-562 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR418295
released
Annotation file set
: ChromHMM 13-state model for for human K562
Lab:
Stephen Parker, UMich
Project:
AMP