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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
3
binding sites
3
candidate regulatory elements
2
accessible chromatin
2
chromatin state
2
histone modifications
2
target gene predictions
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
cell line
Biosample term
21
A549
9
MCF-7
7
H9
7
K562
5
HeLa-S3
5
WI38
4
22Rv1
4
SK-N-DZ
4
SK-N-SH
3
HEK293
3
LNCaP clone FGC
3
MCF 10A
3
T47D
3
endometrium adenocarcinoma
3
immortal human breast epithelial cell line cell
2
A172
2
A673
2
ACC112
2
ACHN
2
AG10803
2
C4-2B
2
CMK
2
Caki2
2
DND-41
2
DOHH2
2
Daoy
2
EH
2
EL
2
ELF-1
2
ELR
2
G401
2
GM04503
2
GM04504
2
GM06990
2
GM08714
2
GM10248
2
GM10266
2
GM12864
2
GM12865
2
GM12875
2
GM12878
2
GM23248
2
GM23338
2
H4
2
H54
2
HAP-1
2
HCT116
2
HL-60
2
HS-27A
2
HS-5
2
HT-29
2
HT1080
2
HUES48
2
HUES6
2
HUES64
2
HepG2
2
IMR-90
2
KBM-7
2
KMS-11
2
KOPT-K1
2
L1-S8
2
LHCN-M2
2
LNCAP
2
Loucy
2
M059J
2
MG63
2
MM.1S
2
NAMALWA
2
NAMALWA cell
2
NB4
2
NCI-H929
2
OCI-LY1
2
OCI-LY3
2
OCI-LY7
2
PC-3
2
PC-9
2
Panc1
2
RCC 7860
2
RPMI7951
2
RPMI8226
2
RWPE1
2
RWPE2
2
SJCRH30
2
SJSA1
2
SK-MEL-5
2
SK-N-MC
2
SU-DHL-6
2
SW480
2
UCSF-4
2
WERI-Rb-1
2
iPS DF 19.11
2
iPS DF 19.7
2
iPS DF 6.9
2
iPS-11a
2
iPS-15b
2
iPS-18a
2
iPS-18c
2
iPS-20b
1
8988T
1
AG04449
1
AG04449 cell
1
AG04450
1
AG04450 cell
1
AG08395 cell
1
AG08396 cell
1
AG09309
1
AG09309 cell
1
AG09319
1
AG09319 cell
1
AG10803 cell
1
AG20443
1
BE(2)-C
1
BE2C
1
BJ
1
BJ cell
1
COLO829
1
CWRU1
1
Caco-2
1
Caco-2 cell
1
D721Med
1
ES-I3
1
GM03348
1
GM12801
1
GM12873
1
GM12874
1
GM12891
1
GM12892
1
GM13976
1
GM13977
1
GM18507
1
GM19238
1
GM19239
1
GM19240
1
GM20000
1
H1
1
H1-hESC
1
H7
1
H7-hESC
1
HCEC 1CT
1
HEK293T
1
HFF-Myc
1
HK-2
1
HK-2 cell
1
HPDE6-E6E7
1
HTR-8/Svneo
1
HuH-7
1
HuH-7.5
1
Ishikawa
1
Jurkat, Clone E6-1
1
KARPAS-422 cell
1
Karpas-422
1
L1-S8R
1
LoVo
1
LoVo cell
1
NCI-H226
1
NCI-H226 cell
1
NCI-H460
1
NCI-H460 cell
1
NT2-D1 cell
1
NT2/D1
1
RCC
1
RKO
1
VCaP
1
VCaP cell
1
colon carcinoma
1
colon epithelial cell
1
foreskin fibroblast
1
iPS DF 4.7
1
iPS DF 4.7 Cell Line
1
iPS-NIHi11
1
iPS-NIHi7
1
lymphocyte
1
medulloblastoma
1
renal cell carcinoma
1
urothelium cell line
Organ
2
connective tissue
2
limb
2
skin of body
Life stage
3
adult
Date released
2
September, 2022
1
February, 2021
Software used
2
r
1
encode-ccres
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
Showing 3 of 3 results
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Download
FileSet
DSR449IDP
released
Annotation file set
: Candidate regulatory elements for BSS00476 GM23248 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR051TBF
released
Annotation file set
: Candidate regulatory elements for BSS00066 AG09309 cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR229GNK
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE GM23248
Lab:
AMP-T2D consortium
Project:
AMP