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Schema
Citing CMDGA
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Annotation type
1
accessible chromatin
Annotation Category
1
cis-regulatory elements
Annotation type Category
ChIP-seq
1
DNase-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
cell line
Biosample term
52
HeLa-S3
47
H1-hESC
21
EndoC_BH1
19
HFFc6
18
K562
10
pituitary stalk
8
GM12878
8
induced pluripotent stem cell
7
H9
7
lymphoblastoid cell line
6
iPSC derived cell line
6
lymphocyte
5
HUES8
4
CyT49
4
HepG2
3
Jurkat
3
U937
2
A549
2
BJAB cell
2
GM18507
2
GM19240
2
H7-hESC
2
HAP-1
2
HCT-116 cell
2
HCT116
2
HT-29
2
IMR-90
2
KARPAS-422 cell
2
LNCAP
2
LoVo cell
2
MCF 10A cell
2
MCF-7
2
MDA-MB-231 cell
2
MIN6
2
MM.1S
2
NCCIT cell
2
OCI-LY7
2
PC-9
2
Rh-4 cell
2
THP-1
2
fibroblast cell line
2
fibroblast of cardiac tissue
2
glomerular visceral epithelial cell
2
macrophage
2
muscle
2
smooth muscle cell of the coronary artery
1
786-O cell
1
A-673 cell
1
A172
1
A673
1
ACHN
1
AG04449 cell
1
AG04450 cell
1
AG08396 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
B-lymphoblastoid cell line
1
BE(2)-C
1
BJ cell
1
CMK
1
COLO-829 cell
1
COLO205
1
Caco-2 cell
1
Caki2
1
D341 Med cell
1
DG-75 cell
1
Daoy
1
ECC-1
1
G-401 cell
1
GM03348
1
GM04503
1
GM04504
1
GM06990
1
GM10248
1
GM10266
1
GM12864
1
GM12865
1
GM13976
1
GM13977
1
GM18486
1
GM18505
1
GM18508
GM18516
1
GM18522
1
GM19099
1
GM19141
1
GM19193
1
GM19204
1
GM19238
1
GM19239
1
GM20000
1
GM23248
1
GP5d
1
H4
1
HAC cell
1
HBMEC cell
1
HEK293
1
HGF
1
HL-60
1
HUES6
1
HeLa cell
1
Hodgkin lymphoma cell line
1
HuH-7
1
HuTu-80 cell
1
KBM-7
1
Kasumi-1
1
L-1236 cell
1
L-428 cell
1
L1-S8
1
L1-S8R
1
LHCN-M2
1
M059J
1
MCF10A-Er-Src cell
1
MG63
1
MOLM-13 cell
1
Myoblasts
1
NAMALWA cell
1
NB-4 cell
1
NCI-H226 cell
1
NHBE cell
1
NHDF cell
1
NHEK
1
NT2-D1 cell
1
Normal Human Astrocytes
1
OCI-AML3
1
PA-TU-8988T cell
1
PANC-1 cell
1
PC-3
1
Panc1
1
RCC 7860
1
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
REH cell
1
RKO
1
RPMI7951
1
RPMI8226
1
RS4-11 cell
1
RWPE1
1
Rh-5 cell
1
Rhabdomyosarcoma
1
SAEC
1
SGBS preadipocytes
1
SJCRH30
1
SJSA1
1
SK-CO-1
1
SK-N-DZ
1
SK-N-MC
1
SK-N-SH
1
SK-N-SH_RA
1
SKH1-Hr hr
1
SKMC
1
SUDHL5
1
SW1116
1
SW480
1
Saos-2 cell
1
T-47D cell
1
T84
1
U-266 cell
1
U-87 MG
1
U2OS
1
WERI-Rb-1
1
WI-38 cell
1
Z-138
1
ZR-75-1 cell
1
acute myeloid leukemia
1
adipose-derived mesenchymal stem cell
1
brain pericyte
1
cardiac myocyte cell derived cell line
1
cells - EBV-transformed lymphocytes
1
choroid plexus epithelial cell
1
colon cancer cell line
1
dermal fibroblast
1
epithelial cell of prostate
1
esophageal epithelial cell
1
fibroblast of the conjunctiva
1
hESC H9
1
hippocampus
1
human amniotic epithelial cell
1
iPS DF 19.11
1
immortal kidney-derived cell line cell
1
lung fibroblast cell line
1
monocyte
1
renal proximal tubule epithelial cell
1
spinal cord
1
urothelial cell
1
vascular smooth muscle cell
Date released
1
June, 2020
Software used
1
macs
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
annotation_type_category!
ChIP-seq
biosample_term_name!
GM18516
Showing 1 of 1 results
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Download
FileSet
DSR463LRQ
released
Annotation file set
: Accessible chromatin annotation for Neural D341 Med from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP