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Schema
Citing CMDGA
Clear Filters
Annotation type
3
candidate regulatory elements
2
binding sites
2
chromatin state
2
target gene predictions
1
accessible chromatin
1
histone modifications
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
ChIP-seq
Available data
2
bed bed3+
2
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
2
GRCh38
Organism
4
Homo sapiens
Biosample type
4
cell line
Biosample term
20
A549
9
K562
9
breast cancer cell
8
MCF-7
7
melanoma
6
fibroblast cell line
5
HepG2
5
prostate cancer cell line
4
GM12878
4
HeLa-S3
4
glioblastoma multiforme cancer stem cell
4
neural progenitor cell
4
neuroblastoma cell
3
22Rv1
3
AG04449 cell
3
AG04450 cell
3
AG09309 cell
3
AG09319 cell
3
AG10803 cell
3
BE(2)-C
3
BJ cell
3
Caco-2 cell
3
GM06990
3
GM08714
3
GM12864
3
GM12865
3
GM12875
3
GM12891
3
GM12892
3
GM19238
3
GM19239
3
GM19240
3
H1-hESC
3
HEK293
3
HL-60
3
IMR-90
3
KARPAS-422 cell
3
NAMALWA cell
3
NT2-D1 cell
3
SK-N-MC
3
SK-N-SH
3
Tumor-derived cell line
3
WERI-Rb-1
3
acute myeloid leukemia
3
dermal fibroblast
3
endometrium adenocarcinoma
3
immortal human breast epithelial cell line cell
3
keratinocyte
3
liposarcoma
3
synovial sarcoma cell
3
triple-negative breast cancer
2
BL-2 cell
2
Burkitt's lymphoma
2
CMK
2
COLO-320 cell
2
DND-41 cell
2
Daoy
2
ECC-1
2
ESC derived cell line
2
Ewing sarcoma
2
Fallopian Tube Carcinoma
2
GM10248
2
GM10266
2
GM10847
2
GM12801
2
GM12872
2
GM12873
2
GM12874
2
GM15510
2
GM18505
2
GM18526
2
GM18951
2
GM19099
2
GM19193
2
GM23248
2
HAC cell
2
HAP-1
2
HBMEC cell
2
HCT-116 cell
2
HEK293-T-REx cell
2
HK-2 cell
2
HS-SY-2 cell
2
HT-29
2
HUES6
2
HUES64
2
HuH-7
2
Jurkat
2
KBM-7
2
LHCN-M2
2
LNCaP clone FGC
2
LoVo cell
2
MG63
2
MM.1S
2
Mantle cell lymphoma
2
NB4
2
NCI-H460 cell
2
NHEK
2
Normal Human Astrocytes
2
OCI-LY1
2
OCI-LY3
2
OCI-LY7
2
PANC-1 cell
2
PC-3
2
PC-9
2
PFSK-1 cell
2
RPMI8226
2
RS4-11 cell
2
RWPE1
2
Raji cell
2
Rh-4 cell
2
SAEC
2
SH-SY5Y cell
2
SJSA1
2
SK-MEL-5 cell
2
SK-N-DZ
2
SK-N-SH_RA
2
SUDHL5
2
SUM-185PE cell
2
SW480
2
T-47D cell
2
T-lymphocyte
2
T47D
2
U-266 cell
2
U-87 MG
2
U2OS
2
VCaP cell
2
WI-38 cell
2
adult acute myeloid leukemia
2
cardiac muscle cell
2
chronic myeloid leukemia cell
2
diffuse intrinsic pontine glioma
2
embryonic stem cell
2
esophageal epithelial cell
2
esophageal squamous cell carcinoma
2
gastric cancer cell
2
glioblastoma cell
2
immortal neural cell line cell
2
lung fibroblast cell line
2
lymphoblastoid cell line
2
metastatic melanoma
2
pancreatic cancer cell
2
pancreatic cell line
2
prostate derived cell line
2
spinal cord
1
143B
1
451Lu cell
1
501A
1
697 cell
1
769-P cell
1
786-O cell
1
8988T
1
A-1847 cell
1
A-375 cell
1
A-498 cell
1
A-673 cell
1
A172
1
A2780 cell
1
A673
1
ACC112
1
ACHN
1
AG08395 cell
1
AG08396 cell
1
AG20443
1
AGS cell
1
ALL-SIL cell
1
AsPC-1 cell
1
B-CPAP cell
1
B-cell acute lymphoblastic leukemia
1
B-cell lymphoma cell
1
B-lymphoblast
1
B-lymphoblastoid cell line
1
B-lymphocyte
1
BCBL-1 cell
1
BEAS-2B cell
1
BEL-7402 cell
1
BG03
1
BJAB cell
1
BL-41 cell
1
BPE cell
1
BT-20 cell
1
BT-474 cell
1
BT-549 cell
1
BeWo cell
1
BxPC-3 cell
1
C4-2B
1
C666-1 cell
1
CA46 cell
1
CAL-51 cell
1
CCLP-1 cell
1
CCRF-CEM cell
1
CFPAC-1 cell
1
CHL-1 cell
1
CHLA-90 cell
1
CHP-134 cell
1
COLO 741 cell
1
COLO-800 cell
1
COLO-829 cell
1
COLO205
1
COLO829
1
CTV-1 cell
Organ
1
penis
Life stage
1
adult
1
newborn
Date released
2
September, 2022
1
February, 2021
1
October, 2022
Software used
3
chromhmm
1
macs
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
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Download
FileSet
DSR072JSG
released
Annotation file set
: Binding sites annotation for AG10803 cell (AG10803) for GOLDENPATH ENCODE DCC
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR763REY
released
Annotation file set
: Chromatin states for BSS00278 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR178IUV
released
Annotation file set
: Chromatin states for BSS00068 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR731DEG
released
Annotation file set
: Binding sites annotation for Epidermis AG10803 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP