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Citing CMDGA
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Annotation type
1
candidate regulatory elements
1
chromatin state
Annotation Category
2
cis-regulatory elements
Target gene links
Annotation type Category
2
ChIP-seq
1
DNase-seq
Available data
1
bed bed3+
1
bed bed9
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
2
cell line
Biosample term
8
H1-hESC
6
22Rv1
6
WI38
3
GM06990
3
GM12864
3
GM12865
3
KOPT-K1
3
L1-S8
3
PC-9
3
Panc1
2
CWRU1
2
GM12891
2
GM12892
2
HK-2 cell
2
L1-S8R
2
NCI-H460 cell
2
NT2-D1 cell
2
colon carcinoma
2
colon epithelial cell
1
BL-2 cell
1
DG-75 cell
1
GM08714
1
GM10248
1
GM10266
1
GM12801
1
GM12873
1
GM12874
1
GM12875
1
GM13976
1
GM13977
1
HCEC 1CT
1
HK-2
1
JVM-2 cell
1
KARPAS-422 cell
1
NCI-H460
1
NT2/D1
1
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
RKO
1
SUDHL5
1
U-266 cell
1
Z-138
1
smooth muscle cell of the coronary artery
Life stage
2
unknown
Date released
2
September, 2022
Software used
1
chromhmm
1
r
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
annotation_category!
Target gene links
Showing 2 of 2 results
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Download
FileSet
DSR237ZUA
released
Annotation file set
: Candidate regulatory elements for BSS00701 HK-2 cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR493SNY
released
Annotation file set
: Chromatin states for BSS00701 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP