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Schema
Citing CMDGA
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Annotation type
2
candidate regulatory elements
1
accessible chromatin
1
binding sites
1
chromatin state
1
target gene predictions
Annotation Category
1
Target gene links
1
cis-regulatory elements
Annotation type Category
2
ChIP-seq
1
DNase-seq
Available data
1
bed bed3+
1
bed bed9
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
2
cell line
Biosample term
58
HeLa-S3
40
H1-hESC
37
A549
30
K562
19
HFFc6
11
MCF-7
10
GM12878
10
pituitary stalk
9
H9
8
lymphocyte
6
endometrium adenocarcinoma
6
immortal human breast epithelial cell line cell
5
HepG2
5
SK-N-SH
4
22Rv1
4
CyT49
4
HCT116
4
HUES8
4
KARPAS-422 cell
4
LNCaP clone FGC
4
NAMALWA cell
4
SK-N-DZ
4
T47D
4
iPSC derived cell line
3
A673
3
GM18507
3
GM19238
3
GM19239
3
GM19240
3
H7-hESC
3
HAP-1
3
HT-29
3
IMR-90
3
LoVo cell
3
MM.1S
3
OCI-LY7
3
PC-9
3
Panc1
3
iPS DF 19.11
2
8988T
2
A172
2
ACC112
2
ACHN
2
AG04449 cell
2
AG04450 cell
2
AG08395 cell
2
AG08396 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803 cell
2
AG20443
2
BE(2)-C
2
BJ cell
2
BJAB cell
2
C4-2B
2
CMK
2
COLO829
2
CWRU1
2
Caco-2 cell
2
Caki2
2
DND-41
2
DOHH2
2
Daoy
2
EH
2
EL
2
ELF-1
2
ELR
2
ES-I3
2
ESC derived cell line
2
G401
2
GM03348
2
GM04503
2
GM04504
2
GM06990
2
GM08714
2
GM10248
2
GM10266
2
GM12864
2
GM12865
2
GM12875
2
GM12891
2
GM12892
2
GM23248
2
GM23338
2
H4
2
H54
2
HEK293
2
HEK293T
2
HK-2 cell
2
HL-60
2
HPDE6-E6E7
2
HS-27A
2
HS-5
2
HT1080
2
HTR-8/Svneo
2
HUES48
2
HUES6
2
HUES64
2
HuH-7
HuH-7.5
2
Jurkat
2
KBM-7
2
KMS-11
2
KOPT-K1
2
L1-S8
2
L1-S8R
2
LHCN-M2
2
Loucy
2
M059J
2
MCF 10A cell
2
MG63
2
NB4
2
NCI-H226 cell
2
NCI-H460 cell
2
NCI-H929
2
NT2-D1 cell
2
OCI-LY1
2
OCI-LY3
2
PC-3
2
RCC 7860
2
RPMI7951
2
RPMI8226
2
RWPE1
2
RWPE2
2
SJCRH30
2
SJSA1
2
SK-MEL-5
2
SK-N-MC
2
SU-DHL-6
2
SW480
2
THP-1
2
U937
2
UCSF-4
2
VCaP cell
2
WERI-Rb-1
2
WI38
2
colon carcinoma
2
colon epithelial cell
2
foreskin fibroblast
2
iPS DF 19.7
2
iPS DF 4.7 Cell Line
2
iPS DF 6.9
2
iPS-11a
2
iPS-15b
2
iPS-18a
2
iPS-18c
2
iPS-20b
2
iPS-NIHi11
2
iPS-NIHi7
2
medulloblastoma
2
renal cell carcinoma
2
urothelium cell line
1
B-lymphoblastoid cell line
1
BL-2 cell
1
DG-75 cell
1
EndoC_BH1
1
GM18486
1
GM18505
1
GM18508
1
GM18516
1
GM18522
1
GM19099
1
GM19141
1
GM19193
1
GM19204
1
HCT-116 cell
1
JVM-2 cell
1
LNCAP
1
MDA-MB-231 cell
1
NCCIT cell
1
SUDHL5
1
U-266 cell
1
Z-138
1
fibroblast cell line
1
induced pluripotent stem cell
1
macrophage
1
monocyte
Organ
2
embryo
Life stage
2
embryonic
Date released
2
September, 2022
Software used
1
chromhmm
1
r
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
biosample_term_name!
HuH-7.5
Showing 2 of 2 results
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Download
FileSet
DSR219QQF
released
Annotation file set
: Target gene predictions for BSS00716 HUES6 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR494MHC
released
Annotation file set
: Chromatin states for BSS00716 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP