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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
3
binding sites
3
candidate regulatory elements
3
target gene predictions
2
accessible chromatin
2
chromatin state
2
histone modifications
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ChIP-seq
Available data
2
bed bed9
File set status
2
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
2
Homo sapiens
Biosample type
2
cell line
Biosample term
18
A549
7
K562
5
MCF-7
3
HeLa-S3
3
endometrium adenocarcinoma
3
immortal human breast epithelial cell line cell
2
22Rv1
2
ESC derived cell line
2
GM12878
2
HepG2
2
KARPAS-422 cell
2
LNCaP clone FGC
2
NAMALWA cell
2
SK-N-DZ
2
SK-N-SH
2
T47D
1
8988T
1
A172
1
A673
1
ACC112
1
ACHN
1
AG04449 cell
1
AG04450 cell
1
AG08395 cell
1
AG08396 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
AG20443
1
BE(2)-C
1
BJ cell
1
BL-2 cell
1
C4-2B
1
CMK
1
COLO829
1
CWRU1
1
Caco-2 cell
1
Caki2
1
DG-75 cell
1
DND-41
1
DOHH2
1
Daoy
1
EH
1
EL
1
ELF-1
1
ELR
1
ES-I3
1
G401
1
GM03348
1
GM04503
1
GM04504
1
GM06990
1
GM08714
1
GM10248
1
GM10266
1
GM12864
1
GM12865
1
GM12875
1
GM12891
1
GM12892
1
GM18507
1
GM19238
1
GM19239
1
GM19240
1
GM23248
1
GM23338
1
H1-hESC
1
H4
1
H54
1
H7-hESC
1
H9
1
HAP-1
1
HCT116
1
HEK293
1
HEK293T
1
HK-2 cell
1
HL-60
1
HPDE6-E6E7
1
HS-27A
1
HS-5
1
HT-29
1
HT1080
1
HTR-8/Svneo
1
HUES48
1
HUES6
1
HUES64
1
HuH-7
1
HuH-7.5
1
IMR-90
1
JVM-2 cell
1
KBM-7
1
KMS-11
1
KOPT-K1
1
L1-S8
1
L1-S8R
1
LHCN-M2
1
LoVo cell
1
Loucy
1
M059J
1
MG63
1
MM.1S
1
NB4
1
NCI-H226 cell
1
NCI-H460 cell
1
NCI-H929
1
NT2-D1 cell
1
OCI-LY1
1
OCI-LY3
1
OCI-LY7
1
PC-3
1
PC-9
1
Panc1
1
RCC 7860
RPMI7951
1
RPMI8226
1
RWPE1
1
RWPE2
1
SJCRH30
1
SJSA1
1
SK-MEL-5
1
SK-N-MC
1
SU-DHL-6
1
SUDHL5
1
SW480
1
U-266 cell
1
UCSF-4
1
VCaP cell
1
WERI-Rb-1
1
WI38
1
Z-138
1
colon carcinoma
1
colon epithelial cell
1
foreskin fibroblast
1
iPS DF 19.11
1
iPS DF 19.7
1
iPS DF 4.7 Cell Line
1
iPS DF 6.9
1
iPS-11a
1
iPS-15b
1
iPS-18a
1
iPS-18c
1
iPS-20b
1
iPS-NIHi11
1
iPS-NIHi7
1
lymphocyte
1
medulloblastoma
1
renal cell carcinoma
1
urothelium cell line
Disease term
1
large-cell immunoblastic lymphoma
Organ
1
blood
1
bodily fluid
Life stage
2
adult
Date released
2
September, 2022
Software used
2
chromhmm
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
biosample_term_name!
RPMI7951
Showing 2 of 2 results
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Download
FileSet
DSR437KLH
released
Annotation file set
: Chromatin states for BSS00067 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR068AXI
released
Annotation file set
: Chromatin states for BSS01391 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP