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Citing CMDGA
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Annotation type
2
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
Available data
1
bed bed9
File set status
1
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
1
Homo sapiens
Biosample type
1
cell line
Biosample term
18
A549
6
K562
5
MCF-7
3
HeLa-S3
3
endometrium adenocarcinoma
3
immortal human breast epithelial cell line cell
2
GM12878
2
LNCaP clone FGC
2
T47D
1
8988T
1
A172
1
ACC112
1
ACHN
1
AG08395 cell
1
AG08396 cell
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
AG20443
1
C4-2B
1
COLO829
1
Caco-2 cell
1
Caki2
1
DOHH2
1
GM04503
1
GM04504
1
GM10248
1
GM10266
1
GM12875
1
GM19238
1
GM19239
1
GM19240
1
GM23248
1
GM23338
1
H4
1
H54
1
HAP-1
1
HCT116
1
HL-60
1
HPDE6-E6E7
1
HS-27A
1
HS-5
1
HT-29
1
HT1080
1
HuH-7
1
HuH-7.5
1
KARPAS-422 cell
1
KBM-7
1
KMS-11
1
LHCN-M2
1
LoVo cell
1
Loucy
1
M059J
1
MM.1S
1
NB4
1
NCI-H226 cell
1
NCI-H929
1
OCI-LY1
1
OCI-LY3
1
OCI-LY7
1
PC-3
1
RCC 7860
1
RPMI7951
1
RPMI8226
1
RWPE1
1
RWPE2
1
SJSA1
1
SK-MEL-5
1
SU-DHL-6
1
SW480
1
VCaP cell
1
iPS-11a
1
iPS-15b
1
iPS-18a
1
iPS-18c
1
iPS-20b
1
iPS-NIHi11
1
iPS-NIHi7
1
renal cell carcinoma
Organ
1
skin of body
Life stage
1
adult
Date released
1
September, 2022
Software used
1
chromhmm
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
biosample_term_name!
AG09309 cell
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FileSet
DSR832ELN
released
Annotation file set
: Chromatin states for BSS00739 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP