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Schema
Citing CMDGA
Clear Filters
Annotation type
1
binding sites
1
candidate regulatory elements
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ChIP-seq
1
DNase-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
cell line
0
primary cell
Biosample term
129
monocyte
64
HeLa-S3
61
A549
54
common myeloid progenitor, CD34-positive
52
H1-hESC
50
CD8-positive, alpha-beta T cell
40
B cell
40
K562
39
endothelial cell
32
CD4-positive, alpha-beta memory T cell
32
hepatocyte
31
CD14-positive monocyte
31
macrophage
30
fibroblast
26
regulatory T cell
25
MCF-7
23
EndoC_BH1
23
epithelial cell of proximal tubule
22
CD8-positive, alpha-beta memory T cell
22
T-helper 1 cell
22
pericyte cell
21
T cell
21
T-helper 17 cell
21
keratinocyte
21
natural killer cell
20
breast cancer cell
20
glomerular endothelial cell
20
mononuclear cell
20
smooth muscle cell
19
HFFc6
19
foreskin keratinocyte
19
pancreatic ductal cell
18
endothelial cell of umbilical vein
18
foreskin fibroblast
18
pancreatic beta cell
17
T-helper 2 cell
17
astrocyte
17
pancreatic alpha cell
17
trophoblast cell
16
H9
16
HepG2
16
endothelial cell of hepatic sinusoid
16
fibroblast of lung
16
pancreatic acinar cell
15
CD4-positive, alpha-beta T cell
15
GM12878
15
fibroblast of cardiac tissue
15
neutrophil
15
osteoblast
15
pancreatic delta cell
14
skeletal muscle myoblast
13
neurosphere
13
skeletal muscle satellite cell
12
bronchial epithelial cell
12
fibroblast of dermis
12
mammary gland epithelial cell
12
naive thymus-derived CD4-positive, alpha-beta T cell
12
neuroblastoma cell
11
erythroblast
11
excitatory neuron
11
lymphoblastoid cell line
11
mammary epithelial cell
10
22Rv1
10
epithelial cell of prostate
10
gastric cancer cell
10
glomerular visceral epithelial cell
10
lymphocyte
9
Rhabdomyosarcoma
9
SK-N-SH
9
cardiac muscle cell
9
hepatic stellate cell
9
kidney tubule cell
9
liposarcoma
8
B-lymphoblastoid cell line
8
HEK293
8
IMR-90
8
choroid plexus epithelial cell
8
colon epithelial cell
8
dermis blood vessel endothelial cell
8
fibroblast cell line
8
immortal human breast epithelial cell line cell
8
myoepithelial cell of mammary gland
8
naive T cell
8
pituitary stalk
8
skeletal muscle fiber
7
GM06990
7
GM12864
7
GM12865
7
GM12875
7
GM19238
7
GM19239
7
GM19240
7
HAP-1
7
HL-60
7
HT-29
7
LNCaP clone FGC
7
MM.1S
7
NAMALWA cell
7
SK-N-DZ
7
SK-N-MC
7
T47D
7
dermis lymphatic vessel endothelial cell
7
endometrium adenocarcinoma
7
mature neutrophil
7
memory B cell
7
mesenchymal stem cell
7
retinal pigment epithelial cell
7
skin fibroblast
6
AG04449 cell
6
AG04450 cell
6
AG09309 cell
6
AG09319 cell
6
AG10803 cell
6
BE(2)-C
6
BJ cell
6
CD1c-positive myeloid dendritic cell
6
CMK
6
Caco-2 cell
6
GM08714
6
GM12891
6
GM12892
6
GM23248
6
HCT116
6
Jurkat
6
KARPAS-422 cell
6
LoVo cell
6
MG63
6
WERI-Rb-1
6
WI38
6
diffuse intrinsic pontine glioma
6
fibroblast of breast
6
fibroblast of mammary gland
6
fibroblast of pulmonary artery
6
iPSC derived cell line
6
induced pluripotent stem cell
6
kidney glomerular epithelial cell
6
naive thymus-derived CD8-positive, alpha-beta T cell
6
pancreatic stellate cell
6
plasma cell
6
renal cortical epithelial cell
6
smooth muscle cell of the coronary artery
6
type I muscle cell
5
cardiac fibroblast
5
A673
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
B Cell
5
CD14-positive, CD16-negative classical monocyte
5
CD4-positive helper T cell
5
Chondroid Chordoma
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
CyT49
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Daoy
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Ewing sarcoma
5
Fibroblast
5
GM10248
5
GM10266
5
GM18507
5
Glomerular Capillary Endothelial Cell
5
H7-hESC
5
HK-2 cell
5
HUES6
5
HUES64
5
HUES8
5
HuH-7
5
Intercalated Cell Type A
5
Intercalated Cell Type B
5
LHCN-M2
5
LNCAP
5
Lymphatic Endothelial Cell
5
Medullary Thick Ascending Limb Cell
5
Monocyte
5
Myofibroblast
5
NB4
5
Non-Classical Monocyte
5
OCI-LY3
5
OCI-LY7
Organ
2
lymph node
Life stage
1
young adult
Date released
2
February, 2021
June, 2020
Software used
1
encode-ccres
1
macs
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
month_released!
June, 2020
Showing 2 of 2 results
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Download
FileSet
DSR161CIU
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE GM20000
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR324FVX
released
Annotation file set
: Binding sites annotation for Blood GM20000 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP