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Schema
Citing CMDGA
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Annotation type
7
chromatin state
7
target gene predictions
5
accessible chromatin
5
candidate regulatory elements
1
binding sites
1
gene expression
1
histone modifications
Annotation Category
7
cis-regulatory elements
Annotation type Category
7
ChIP-seq
Available data
4
bed bed3+
3
bed bed9
File set status
7
released
Genome assembly (visualization)
7
hg19
3
GRCh38
Organism
7
Homo sapiens
Biosample type
7
in vitro differentiated cells
Biosample term
10
hematopoietic multipotent progenitor cell
6
adipocyte
5
embryonic stem cell
4
neural progenitor cell
2
endodermal cell
2
mesenchymal stem cell
2
muscle cell
1
bipolar neuron
1
cardiac mesoderm primordium
1
cardiac muscle cell
1
ectodermal cell
1
hepatocyte
1
islet precursor cell
1
mesendoderm
1
mesodermal cell
1
neural cell
1
neuron
1
olfactory neurosphere cell line
1
smooth muscle cell
1
trophoblast cell
Organ
6
connective tissue
1
nose
Life stage
2
adult
1
unknown
Date released
4
August, 2017
3
September, 2022
Software used
7
chromhmm
Lab
4
Stephen Parker, UMich
3
AMP-T2D consortium
Project
7
AMP
RFA
7
AMP
Showing 7 of 7 results
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Download
FileSet
DSR200PFR
released
Annotation file set
: Chromatin states for BSS01392 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR148SNR
released
Annotation file set
: Chromatin states for BSS00039 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR379DHG
released
Annotation file set
: Chromatin states for BSS00038 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR644651
released
Annotation file set
: ChromHMM 13-state model for hASC-t4
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR798156
released
Annotation file set
: ChromHMM 13-state model for hASC-t3
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR104634
released
Annotation file set
: ChromHMM 13-state model for hASC-t2
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR863340
released
Annotation file set
: ChromHMM 13-state model for hASC-t1
Lab:
Stephen Parker, UMich
Project:
AMP