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Schema
Citing CMDGA
Clear Filters
Annotation type
6
chromatin state
6
target gene predictions
4
accessible chromatin
4
candidate regulatory elements
1
binding sites
1
gene expression
1
histone modifications
Annotation Category
7
cis-regulatory elements
Annotation type Category
7
ChIP-seq
Available data
5
bed bed3+
2
bed bed9
File set status
7
released
Genome assembly (visualization)
7
hg19
2
GRCh38
Organism
7
Homo sapiens
Biosample type
7
in vitro differentiated cells
Biosample term
19
neural progenitor cell
11
hematopoietic multipotent progenitor cell
7
adipocyte
6
embryonic stem cell
6
neuroblastoma cell line
5
T-cell acute lymphoblastic leukemia
4
rhabdomyosarcoma cell
3
mesenchymal stem cell
3
pancreatic ductal adenocarcinoma
2
B cell
2
colon adenocarcinoma
2
endodermal cell
2
endometriosis
2
esophageal adenocarcinoma
2
medulloblastoma cell line
2
mesendoderm
2
mesodermal cell
2
muscle cell
2
neuronal stem cell
1
BICR 31
1
Barrett's epithelial cell line
1
CD4-positive helper T cell
1
CD8-Positive T-Lymphocytes
1
Chondroid Chordoma
1
EAhy 926 cell
1
T-lymphoma cell line
1
Th1 cell
1
Uveal Melanoma
1
adipose-derived stem cell
1
atypical teratoid rhabdoid tumor
1
bipolar neuron
1
cardiac mesoderm primordium
1
cardiac muscle cell
1
chondroblastoma
1
chronic lymphocytic leukemia
1
chronic myelomonocytic leukemia
1
colon carcinoma
1
colonic adenoma cell
1
colorectal adenocarcinoma
1
colorectal cancer
1
colorectal carcinoma
1
diffuse intrinsic pontine glioma
1
diffuse large B-cell lymphoma
1
ectodermal cell
1
embryonic fibroblast
1
endometrial stromal cell
1
endometrial stromal tumor
1
endometrioid carcinoma
1
ependymoma
1
epidermal stem cell
1
erythroid progenitor cell
1
fibroblast
1
fibroblast-like synoviocyte
1
foreskin keratinocyte
1
foreskin melanocyte
1
hESC cell
1
head and neck squamous cell carcinoma BICR 16
1
head and neck squamous cell carcinoma BICR 6
1
hepatocellular carcinoma
1
hepatocyte
1
iPS DF 4.7 Cell Line
1
islet precursor cell
1
lymphoid progenitor cell
1
mammary gland epithelial cell
1
melanoma cell line
1
natural killer cell
1
neural cell
1
neuron
1
olfactory neurosphere cell line
1
osteosarcoma
1
secretory cell
1
smooth muscle cell
1
trophoblast cell
Organ
7
connective tissue
Life stage
1
adult
1
unknown
Date released
4
August, 2017
2
September, 2022
1
February, 2021
Software used
6
chromhmm
1
macs
Lab
4
Stephen Parker, UMich
3
AMP-T2D consortium
Project
7
AMP
RFA
7
AMP
Showing 7 of 7 results
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Download
FileSet
DSR148SNR
released
Annotation file set
: Chromatin states for BSS00039 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR379DHG
released
Annotation file set
: Chromatin states for BSS00038 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR014GTX
released
Annotation file set
: Histone modifications annotation for Adipocyte Adipocytes from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR644651
released
Annotation file set
: ChromHMM 13-state model for hASC-t4
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR798156
released
Annotation file set
: ChromHMM 13-state model for hASC-t3
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR104634
released
Annotation file set
: ChromHMM 13-state model for hASC-t2
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR863340
released
Annotation file set
: ChromHMM 13-state model for hASC-t1
Lab:
Stephen Parker, UMich
Project:
AMP