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Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ATAC-seq
Available data
2
bed bed3+
2
bigWig
File set status
2
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
2
Homo sapiens
Biosample type
2
in vitro differentiated cells
Biosample term
25
neural progenitor cell
8
T-cell acute lymphoblastic leukemia
8
embryonic stem cell
8
neuroblastoma cell line
6
adipocyte
6
retinal pigment epithelial cell
5
SGBS preadipocytes
5
chondrocyte
5
neuronal stem cell
4
B cell
4
adipose-derived stem cell
4
colon adenocarcinoma
4
rhabdomyosarcoma cell
3
esophageal adenocarcinoma
3
foreskin keratinocyte
3
foreskin melanocyte
3
hematopoietic multipotent progenitor cell
3
iPS DF 4.7 Cell Line
3
mammary gland epithelial cell
3
mesenchymal stem cell
3
mesendoderm
3
pancreatic ductal adenocarcinoma
2
BICR 31
2
CD4-positive helper T cell
2
CD8-Positive T-Lymphocytes
2
EAhy 926 cell
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
T-lymphoma cell line
2
Th1 cell
2
atypical teratoid rhabdoid tumor
2
chronic myelomonocytic leukemia
2
colorectal adenocarcinoma
2
dermis microvascular lymphatic vessel endothelial cell
2
differentiating adipose-derived stem cell
2
diffuse intrinsic pontine glioma
2
diffuse large B-cell lymphoma
2
endometrial stromal cell
2
endometrial stromal tumor
2
endometriosis
2
epidermal stem cell
2
erythroid progenitor cell
2
fibroblast
2
medulloblastoma cell line
2
natural killer cell
2
osteosarcoma
1
Barrett's epithelial cell line
1
CD8-positive, alpha-beta T cell
1
Chondroid Chordoma
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
T cell
1
Uveal Melanoma
1
bipolar neuron
1
cardiac muscle cell
1
cardiac precursors
1
chondroblastoma
1
chronic lymphocytic leukemia
1
colon carcinoma
1
colonic adenoma cell
1
colorectal cancer
1
colorectal carcinoma
1
embryonic fibroblast
1
endometrioid carcinoma
1
ependymoma
1
erythroid cell
1
excitatory neuron
1
fibroblast-like synoviocyte
1
hESC cell
1
head and neck squamous cell carcinoma BICR 16
1
head and neck squamous cell carcinoma BICR 6
1
hematopoietic stem cell
1
hepatocellular carcinoma
1
hippocampal neuron
1
lower motor neuron
1
lymphoid progenitor cell
1
melanoma cell line
1
mesodermal cell
1
neuron cell of Hypothalamus (neuron)
1
olfactory neurosphere cell line
1
renal cell carcinoma
1
secretory cell
1
skin fibroblast
Date released
2
November, 2019
Software used
2
deltasvm
2
macs
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
Showing 2 of 2 results
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Download
FileSet
DSR163OWK
released
Annotation file set
: Induced Pluripotent Stem Cell derived from fibroblasts accessible chromatin annotation of overlapping ATAC-seq sites from 2 samples with most significant peak selected
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR003GNM
released
Annotation file set
: Induced Pluripotent Stem Cell derived from beta-cells accessible chromatin annotation of overlapping ATAC-seq sites from 3 samples with most significant peak selected
Lab:
AMP-T2D consortium
Project:
AMP