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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
binding sites
1
gene expression
1
histone modifications
Annotation Category
2
cis-regulatory elements
1
Gene expression levels
Annotation type Category
1
ChIP-seq
1
DNase-seq
1
RNA-seq
Available data
2
bed bed3+
1
tsv
File set status
3
released
Genome assembly (visualization)
2
hg19
Organism
3
Homo sapiens
Biosample type
6
primary cell
3
in vitro differentiated cells
Biosample term
46
neural progenitor cell
42
hematopoietic multipotent progenitor cell
22
adipocyte
13
embryonic stem cell
11
cardiomyocytes
10
mesenchymal stem cell
9
extended pluripotent stem (EPS) cells
9
induced pluripotent stem cell
9
progenitor cell of endocrine pancreas
8
cardiomyocytes (cardiac muscle cell)
8
endodermal cell
7
cardiac muscle cell
7
mesendoderm
7
mesodermal cell
6
bipolar neuron
6
cardiac precursors (cardiac muscle cell)
6
dendritic cell
6
muscle cell
6
neuroblastoma cell line
6
neuronal stem cell
6
retinal pigment epithelial cell
5
SGBS preadipocytes
5
T-cell acute lymphoblastic leukemia
5
chondrocyte
5
neural cell
5
smooth muscle cell
5
trophoblast cell
4
B cell
4
Pancreatic progenitors (progenitor cell of endocrine pancreas)
4
ectodermal cell
4
hepatocyte
4
islet precursor cell
4
neuron
4
olfactory neurosphere cell line
4
rhabdomyosarcoma cell
3
adipose-derived stem cell
3
cardiac mesoderm primordium
3
hepatocyte(AFP)
3
pancreatic ductal adenocarcinoma
3
pancreatic ductal cell
2
CD4-positive helper T cell
2
cardiac myoblast
2
cardiovascular progenitor cell
2
colon adenocarcinoma
2
differentiating adipose-derived stem cell
2
endometriosis
2
esophageal adenocarcinoma
2
excitatory neuron
2
foreskin keratinocyte
2
foreskin melanocyte
2
hippocampal neuron
2
iPS DF 4.7 Cell Line
2
lower motor neuron
2
lymphocyte of B lineage (iPSC)
2
mammary gland epithelial cell
2
medulloblastoma cell line
2
myocyte
2
myotube
2
natural killer cell
2
neuroepithelial stem cell
1
Adipose SGBS cell line (adipocyte)
1
BICR 31
1
Barrett's epithelial cell line
1
CD8-Positive T-Lymphocytes
1
CD8-positive, alpha-beta T cell
1
Chondroid Chordoma
1
EAhy 926 cell
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
Preadipose SGBS cell line (adipocyte)
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
T cell
1
T-lymphoma cell line
1
Th1 cell
1
Uveal Melanoma
1
atypical teratoid rhabdoid tumor
1
cardiac fibroblast
1
cardiac muscle cell (pacemaker cell)
1
cardiac precursors
1
chondroblastoma
1
chronic lymphocytic leukemia
1
chronic myelomonocytic leukemia
1
colon carcinoma
1
colonic adenoma cell
1
colorectal adenocarcinoma
1
colorectal cancer
1
colorectal carcinoma
1
dermis microvascular lymphatic vessel endothelial cell
1
diffuse intrinsic pontine glioma
1
diffuse large B-cell lymphoma
1
ecto neural progenitor cell
1
embryonic fibroblast
1
endometrial stromal cell
1
endometrial stromal tumor
1
endometrioid carcinoma
1
endothelial cell
1
ependymoma
1
epidermal stem cell
1
erythroid cell
1
erythroid progenitor cell
1
fibroblast
1
fibroblast-like synoviocyte
1
hESC cell
1
head and neck squamous cell carcinoma BICR 16
1
head and neck squamous cell carcinoma BICR 6
1
hepatocellular carcinoma
1
intermediate cardiomyocytes
1
intermediate endothelial cell
1
intermediate smooth muscle cell
1
lymphoid progenitor cell
1
melanoma cell line
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
mid-neurogenesis radial glial cells
1
neuron cell of Hypothalamus (neuron)
1
osteosarcoma
1
radial glial cell
1
renal cell carcinoma
1
secretory cell
1
skeletal muscle myoblast
1
skin fibroblast
1
stem cell
1
white adipose cell
Organ
2
penis
1
embryo
Date released
1
February, 2021
1
June, 2020
1
May, 2021
Software used
2
macs
1
r
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
annotation_type!
binding sites
Showing 3 of 3 results
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Download
FileSet
DSR857WVQ
released
Annotation file set
: Gene expression annotation of mesodermal cell_papcemaker intermediate (PI) ISL1+HCN4+ on day 6 from embryonic stem cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR388WYG
released
Annotation file set
: Histone modifications annotation for Epidermis Melanocytes from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR895XQC
released
Annotation file set
: Accessible chromatin annotation for Epidermis Melanocytes from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP