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Schema
Citing CMDGA
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Annotation type
8
target gene predictions
Annotation Category
8
Target gene links
Annotation type Category
6
ATAC-seq
6
DNase-seq
6
H3K27ac ChIP-Seq
1
HiC
1
pCHi-C
Available data
8
bed bed3+
File set status
8
released
Genome assembly (visualization)
8
hg19
Organism
8
Homo sapiens
Biosample type
8
in vitro differentiated cells
Biosample term
10
hematopoietic multipotent progenitor cell
6
adipocyte
6
dendritic cell
5
neural progenitor cell
3
cardiomyocytes (cardiac muscle cell)
3
mesenchymal stem cell
2
bipolar neuron
2
endodermal cell
2
lymphocyte of B lineage (iPSC)
2
mesendoderm
2
muscle cell
2
trophoblast cell
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
cardiac mesoderm primordium
1
cardiac muscle cell
1
cardiac precursors (cardiac muscle cell)
ectodermal cell
1
embryonic stem cell
1
hepatocyte
1
islet precursor cell
1
mesodermal cell
1
myotube
1
neural cell
1
neuron
1
neuronal stem cell
1
olfactory neurosphere cell line
1
skeletal muscle myoblast
1
smooth muscle cell
1
white adipose cell
Life stage
2
adult
Date released
6
May, 2021
1
March, 2020
1
May, 2020
Software used
6
abc
1
chicago
1
hiccups
Lab
6
Jesse Engreitz, Stanford University
2
AMP-T2D consortium
Project
8
AMP
RFA
8
AMP
biosample_term_name!
ectodermal cell
Showing 8 of 8 results
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FileSet
DSR599YMO
released
Annotation file set
: enhancer-gene predicton of dendritic_cell_treated_with_Lipopolysaccharide_100_ng-mL_for_6_hour-Garber2017 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR694OVG
released
Annotation file set
: enhancer-gene predicton of dendritic_cell_treated_with_Lipopolysaccharide_100_ng-mL_for_4_hour-Garber2017 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR015NPU
released
Annotation file set
: enhancer-gene predicton of dendritic_cell_treated_with_Lipopolysaccharide_100_ng-mL_for_30_minute-Garber2017 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR132FCP
released
Annotation file set
: enhancer-gene predicton of dendritic_cell_treated_with_Lipopolysaccharide_100_ng-mL_for_2_hour-Garber2017 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR549DHG
released
Annotation file set
: enhancer-gene predicton of dendritic_cell_treated_with_Lipopolysaccharide_100_ng-mL_for_1_hour-Garber2017 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR046SIQ
released
Annotation file set
: enhancer-gene predicton of dendritic_cell_treated_with_Lipopolysaccharide_0_ng-mL_for_0_hour-Garber2017 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR360EAO
released
Annotation file set
: A target gene prediction annotation in lymphocyte of B lineage (iPSC) of DSR763JZB Hi-C E-MTAB-6014
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR991ZOB
released
Annotation file set
: A target gene prediction annotation in lymphocyte of B lineage (iPSC) of DSR535XNG pCHi-C E-MTAB-6014
Lab:
AMP-T2D consortium
Project:
AMP