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Citing CMDGA
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Annotation type
1
accessible chromatin
1
target gene predictions
Annotation Category
1
Target gene links
1
cis-regulatory elements
Annotation type Category
ChIP-seq
4
DNase-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
in vitro differentiated cells
Biosample term
18
neural progenitor cell
11
cardiomyocytes
9
adipocyte
9
extended pluripotent stem (EPS) cells
9
induced pluripotent stem cell
9
progenitor cell of endocrine pancreas
8
cardiomyocytes (cardiac muscle cell)
7
embryonic stem cell
6
cardiac precursors (cardiac muscle cell)
6
dendritic cell
6
retinal pigment epithelial cell
5
SGBS preadipocytes
5
chondrocyte
4
Pancreatic progenitors (progenitor cell of endocrine pancreas)
3
hepatocyte(AFP)
3
pancreatic ductal cell
2
B cell
2
adipose-derived stem cell
2
bipolar neuron
2
differentiating adipose-derived stem cell
2
excitatory neuron
2
hematopoietic multipotent progenitor cell
2
hippocampal neuron
2
lower motor neuron
2
lymphocyte of B lineage (iPSC)
2
mesenchymal stem cell
2
mesendoderm
2
neuronal stem cell
1
Adipose SGBS cell line (adipocyte)
1
CD4-positive helper T cell
1
CD8-positive, alpha-beta T cell
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
Preadipose SGBS cell line (adipocyte)
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
T cell
1
cardiac fibroblast
1
cardiac muscle cell
1
cardiac muscle cell (pacemaker cell)
1
cardiac precursors
1
dermis microvascular lymphatic vessel endothelial cell
1
endothelial cell
1
erythroid cell
1
foreskin keratinocyte
1
foreskin melanocyte
1
iPS DF 4.7 Cell Line
1
intermediate cardiomyocytes
1
intermediate endothelial cell
1
intermediate smooth muscle cell
1
mammary gland epithelial cell
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
myocyte
1
myotube
1
natural killer cell
1
neuron cell of Hypothalamus (neuron)
1
olfactory neurosphere cell line
1
renal cell carcinoma
1
skeletal muscle myoblast
1
skin fibroblast
1
smooth muscle cell
1
stem cell
1
trophoblast cell
1
white adipose cell
Date released
1
June, 2020
1
May, 2021
Software used
1
abc
1
macs
Lab
1
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
2
AMP
RFA
2
AMP
annotation_type_category!
ChIP-seq
Showing 2 of 2 results
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Download
FileSet
DSR357IHY
released
Annotation file set
: enhancer-gene predicton of H1_Derived_Neuronal_Progenitor_Cultured_Cells-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR874XAB
released
Annotation file set
: Accessible chromatin annotation for Pluripotent stem cell hESC derived neural cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP