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Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
3
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
1
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
tissue
0
in vitro differentiated cells
Biosample term
87
heart
84
stomach
74
kidney
70
brain
67
muscle of arm
66
lung
62
small intestine
60
adrenal gland
59
placenta
58
muscle of leg
56
large intestine
54
muscle of back
52
left lung
48
thymus
45
liver
45
right lung
42
hematopoietic multipotent progenitor cell
41
right kidney
40
renal cortex interstitium
40
renal pelvis
38
neural progenitor cell
38
retina
36
left kidney
32
heart left ventricle
32
spleen
30
spinal cord
28
adipose tissue
24
islet of Langerhans
23
sigmoid colon
22
adipocyte
22
body of pancreas
22
tibial nerve
21
pancreas
20
pigmented layer of retina
20
psoas muscle
19
caudate nucleus
19
ovary
18
coronary artery
18
gastrocnemius medialis
18
heart right ventricle
18
thyroid gland
18
transverse colon
17
muscle of trunk
17
tibial artery
16
chorionic villus
16
right atrium auricular region
16
testis
16
upper lobe of left lung
15
ascending aorta
15
endocrine pancreas
15
layer of hippocampus
15
omental fat pad
15
skeletal muscle tissue
15
substantia nigra
14
Peyer's patch
13
cerebellum
13
embryonic stem cell
13
frontal cortex
13
prostate gland
13
subcutaneous adipose tissue
13
temporal lobe
12
aorta
12
left renal pelvis
12
right renal pelvis
11
Ammon's horn
11
breast epithelium
11
esophagus squamous epithelium
11
left cardiac atrium
11
left renal cortex interstitium
11
mesenchymal stem cell
11
putamen
11
thoracic aorta
11
trophoblast
10
angular gyrus
10
chorion membrane
10
colonic mucosa
10
esophagus muscularis mucosa
10
lower leg skin
10
right renal cortex interstitium
9
cingulate gyrus
9
duodenal mucosa
9
esophagus
9
eye
9
mucosa of rectum
9
parathyroid adenoma
9
stomach smooth muscle
9
tongue
8
T-cell acute lymphoblastic leukemia
8
endodermal cell
8
limb
8
mesendoderm
8
muscle layer of colon
8
muscle layer of duodenum
8
neuroblastoma cell line
8
neuronal stem cell
8
right lobe of liver
8
urinary bladder
8
vagina
7
cardiac muscle cell
7
gastroesophageal sphincter
7
globus pallidus
7
mesodermal cell
7
midbrain
7
occipital lobe
7
right cardiac atrium
7
uterus
6
Brodmann (1909) area 46
6
bipolar neuron
6
dendritic cell
6
muscle cell
6
retinal pigment epithelial cell
6
subcutaneous abdominal adipose tissue
6
superior temporal gyrus
6
umbilical cord
5
SGBS preadipocytes
5
amygdala
5
cartilage tissue
5
cerebellar cortex
5
cerebellum (Hemisphere)
5
chondrocyte
5
germinal matrix
5
hypothalamus
5
medulla oblongata
5
middle frontal gyrus
5
neural cell
5
nucleus accumbens
5
pons
5
trophoblast cell
4
B cell
4
C1 segment of cervical spinal cord
4
Pancreatic progenitors (progenitor cell of endocrine pancreas)
4
amnion
4
anterior cingulate cortex
4
cardiomyocytes (cardiac muscle cell)
4
colon adenocarcinoma
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
ectodermal cell
4
embryonic facial prominence
4
femur
4
gastrocnemius medialis(Muscle - Skeletal)
4
hepatocyte
4
inferior parietal cortex
4
islet precursor cell
4
left ventricle myocardium
4
mucosa of stomach
4
neuron
4
olfactory neurosphere cell line
4
rectum smooth muscle tissue
4
rhabdomyosarcoma cell
4
smooth muscle cell
3
arm bone
3
cardiac mesoderm primordium
3
cortex of kidney
3
esophageal adenocarcinoma
3
foreskin keratinocyte
3
foreskin melanocyte
3
germinal center
3
iPS DF 4.7 Cell Line
3
leg bone
3
mammary gland epithelial cell
3
pancreatic ductal adenocarcinoma
3
prefrontal cortex
3
skin of body
3
suprapubic skin
2
hindlimb muscle
2
muscle of leg
2
BICR 31
2
CD4-positive helper T cell
2
CD8-Positive T-Lymphocytes
2
EAhy 926 cell
2
T-lymphoma cell line
2
Th1 cell
2
adipose-derived stem cell
2
atypical teratoid rhabdoid tumor
2
blood
2
breast carcinoma
2
cardiac myoblast
2
cardiac precursors (cardiac muscle cell)
2
cardiovascular progenitor cell
2
chorion
2
chronic myelomonocytic leukemia
2
colorectal adenocarcinoma
2
dermis microvascular lymphatic vessel endothelial cell
2
diffuse intrinsic pontine glioma
2
diffuse large B-cell lymphoma
2
endometrial stromal cell
2
endometrial stromal tumor
2
endometriosis
2
endometrium cancer
2
epidermal stem cell
2
erythroid progenitor cell
2
fibroblast
2
first pancreatic bud
2
forelimb muscle
2
kidney epithelium
2
lymphocyte of B lineage (iPSC)
2
mammary gland
2
medulloblastoma cell line
2
middle frontal area 46
2
myotube
Organ
4
brain
Life stage
3
adult
Date released
3
September, 2022
1
June, 2020
Software used
2
r
1
chromhmm
1
macs
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
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Download
FileSet
DSR078FOK
released
Annotation file set
: Candidate regulatory elements for BSS00729 inferior parietal cortex from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR847XAH
released
Annotation file set
: Target gene predictions for BSS00729 inferior parietal cortex from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR051UFI
released
Annotation file set
: Chromatin states for BSS00729 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR393BDV
released
Annotation file set
: Accessible chromatin annotation for Neural Inferior parietal cortex from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP