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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
1
candidate regulatory elements
1
chromatin state
1
gene expression
1
histone modifications
1
target gene predictions
1
variant allelic effects
Annotation Category
1
Genetic variant effects
1
Target gene links
Annotation type Category
2
DNase-seq
1
ChIP-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
tissue
0
in vitro differentiated cells
Biosample term
22
heart
21
stomach
17
adrenal gland
17
brain
17
lung
17
muscle of arm
17
small intestine
15
kidney
15
placenta
14
large intestine
14
muscle of leg
14
thymus
13
left lung
13
muscle of back
11
right kidney
11
right lung
10
hematopoietic multipotent progenitor cell
10
liver
10
renal cortex interstitium
10
renal pelvis
9
adipose tissue
9
heart left ventricle
9
left kidney
8
psoas muscle
8
spinal cord
8
spleen
7
sigmoid colon
6
adipocyte
6
body of pancreas
6
dendritic cell
6
heart right ventricle
6
ovary
6
pancreas
5
coronary artery
5
gastrocnemius medialis
5
muscle of trunk
5
neural progenitor cell
5
thyroid gland
5
tibial nerve
5
transverse colon
4
aorta
4
cardiomyocytes (cardiac muscle cell)
4
caudate nucleus
4
chorionic villus
4
endocrine pancreas
4
retina
4
right atrium auricular region
4
tibial artery
3
Peyer's patch
3
ascending aorta
3
breast epithelium
3
chorion membrane
3
esophagus
3
frontal cortex
3
layer of hippocampus
3
left renal cortex interstitium
3
left renal pelvis
3
mesenchymal stem cell
3
right renal cortex interstitium
3
right renal pelvis
3
skeletal muscle tissue
3
testis
3
thoracic aorta
3
trophoblast
3
upper lobe of left lung
2
muscle of leg
2
Ammon's horn
2
Brodmann (1909) area 46
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
angular gyrus
2
bipolar neuron
2
cardiac precursors (cardiac muscle cell)
2
cerebellum
2
cingulate gyrus
2
colonic mucosa
2
duodenal mucosa
2
endodermal cell
2
esophagus muscularis mucosa
2
esophagus squamous epithelium
2
eye
2
globus pallidus
2
islet of Langerhans
2
left cardiac atrium
2
limb
2
lower leg skin
2
lymphocyte of B lineage (iPSC)
2
medulla oblongata
2
mesendoderm
2
midbrain
2
middle frontal gyrus
2
mucosa of rectum
2
muscle cell
2
muscle layer of colon
2
muscle layer of duodenum
2
occipital lobe
2
omental fat pad
2
parathyroid adenoma
2
pons
2
prostate gland
2
putamen
2
right cardiac atrium
2
stomach smooth muscle
2
substantia nigra
2
superior temporal gyrus
2
temporal lobe
2
tongue
2
trophoblast cell
2
urinary bladder
2
uterus
2
vagina
1
hindlimb muscle
1
left kidney
1
omental fat pad
1
Adipose SGBS cell line (adipocyte)
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
Preadipose SGBS cell line (adipocyte)
1
amnion
1
arm bone
1
beige adipocyte
1
bladder (urinary bladder)
1
cardiac mesoderm primordium
1
cardiac muscle cell
1
cardiac ventricle
1
cerebellar cortex
1
cerebellum (Hemisphere)
1
dorsolateral prefrontal cortex
1
ectodermal cell
1
embryonic facial prominence
1
embryonic stem cell
1
femur
1
gastric (mucosa of stomach)
1
gastroesophageal sphincter
1
germinal center
1
germinal matrix
1
hepatocyte
1
inferior parietal cortex
1
islet precursor cell
1
leg bone
1
mesodermal cell
1
mucosa of stomach
1
myotube
1
neural cell
1
neuron
1
neuronal stem cell
1
olfactory neurosphere cell line
1
rectum smooth muscle tissue
1
right lobe of liver
1
skeletal muscle myoblast
1
skin of body
1
smooth muscle cell
1
subcutaneous adipose tissue
1
umbilical cord
1
white adipose cell
1
white adipose tissue
Life stage
1
adult
Date released
1
May, 2020
1
September, 2022
Software used
1
deltasvm
1
r
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
Showing 2 of 2 results
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Download
FileSet
DSR357LUY
released
Annotation file set
: Target gene predictions for BSS01388 occipital lobe from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR024XWE
released
Annotation file set
: Genetic variants with deltaSVM predictions in brain occipital lobe DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP