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Schema
Citing CMDGA
Clear Filters
Annotation type
1
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
2
cis-regulatory elements
1
Target gene links
Annotation type Category
3
ChIP-seq
2
DNase-seq
Available data
2
bed bed3+
1
bed bed9
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
in vitro differentiated cells
Biosample term
44
neural progenitor cell
32
hematopoietic multipotent progenitor cell
18
adipocyte
12
embryonic stem cell
9
extended pluripotent stem (EPS) cells
9
progenitor cell of endocrine pancreas
8
mesenchymal stem cell
6
cardiomyocytes (cardiac muscle cell)
6
dendritic cell
6
endodermal cell
6
muscle cell
6
retinal pigment epithelial cell
5
SGBS preadipocytes
5
bipolar neuron
5
chondrocyte
5
mesendoderm
4
Pancreatic progenitors (progenitor cell of endocrine pancreas)
4
cardiac muscle cell
4
olfactory neurosphere cell line
4
smooth muscle cell
4
trophoblast cell
3
cardiac mesoderm primordium
3
cardiac precursors (cardiac muscle cell)
3
ectodermal cell
3
hepatocyte
3
hepatocyte(AFP)
3
islet precursor cell
3
mesodermal cell
3
neural cell
3
neuron
3
pancreatic ductal cell
2
B cell
2
adipose-derived stem cell
2
differentiating adipose-derived stem cell
2
excitatory neuron
2
hippocampal neuron
2
lower motor neuron
2
lymphocyte of B lineage (iPSC)
2
neuronal stem cell
1
Adipose SGBS cell line (adipocyte)
1
CD4-positive helper T cell
1
CD8-positive, alpha-beta T cell
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
Preadipose SGBS cell line (adipocyte)
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
T cell
1
cardiac fibroblast
1
cardiac muscle cell (pacemaker cell)
1
cardiac precursors
1
dermis microvascular lymphatic vessel endothelial cell
1
endothelial cell
1
erythroid cell
1
foreskin keratinocyte
1
foreskin melanocyte
1
iPS DF 4.7 Cell Line
1
intermediate cardiomyocytes
1
intermediate endothelial cell
1
intermediate smooth muscle cell
1
mammary gland epithelial cell
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
myotube
1
natural killer cell
1
neuron cell of Hypothalamus (neuron)
1
renal cell carcinoma
1
skeletal muscle myoblast
1
skin fibroblast
1
stem cell
1
white adipose cell
Organ
3
embryo
Life stage
3
embryonic
Date released
3
September, 2022
Software used
2
r
1
chromhmm
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
month_released!
February, 2021
Showing 3 of 3 results
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Download
FileSet
DSR289IIV
released
Annotation file set
: Candidate regulatory elements for BSS00169 cardiac mesoderm primordium from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR890RKI
released
Annotation file set
: Target gene predictions for BSS00169 cardiac mesoderm primordium from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR372DTL
released
Annotation file set
: Chromatin states for BSS00169 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP