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Citing CMDGA
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Annotation type
1
candidate regulatory elements
1
chromatin state
target gene predictions
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ChIP-seq
1
DNase-seq
Available data
1
bed bed3+
1
bed bed9
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
2
in vitro differentiated cells
Biosample term
39
neural progenitor cell
22
hematopoietic multipotent progenitor cell
12
adipocyte
11
embryonic stem cell
9
extended pluripotent stem (EPS) cells
9
progenitor cell of endocrine pancreas
6
retinal pigment epithelial cell
5
SGBS preadipocytes
5
chondrocyte
5
mesenchymal stem cell
4
Pancreatic progenitors (progenitor cell of endocrine pancreas)
4
endodermal cell
4
muscle cell
3
bipolar neuron
3
cardiac muscle cell
3
cardiomyocytes (cardiac muscle cell)
3
hepatocyte(AFP)
3
mesendoderm
3
olfactory neurosphere cell line
3
pancreatic ductal cell
3
smooth muscle cell
2
B cell
2
adipose-derived stem cell
2
cardiac mesoderm primordium
2
cardiac precursors (cardiac muscle cell)
2
differentiating adipose-derived stem cell
2
ectodermal cell
2
excitatory neuron
2
hepatocyte
2
hippocampal neuron
2
islet precursor cell
2
lower motor neuron
2
mesodermal cell
2
neural cell
2
neuron
2
trophoblast cell
1
Adipose SGBS cell line (adipocyte)
1
CD4-positive helper T cell
1
CD8-positive, alpha-beta T cell
1
Preadipose SGBS cell line (adipocyte)
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
T cell
1
cardiac fibroblast
1
cardiac muscle cell (pacemaker cell)
1
cardiac precursors
1
dermis microvascular lymphatic vessel endothelial cell
1
endothelial cell
1
erythroid cell
1
foreskin keratinocyte
1
foreskin melanocyte
1
iPS DF 4.7 Cell Line
1
intermediate cardiomyocytes
1
intermediate endothelial cell
1
intermediate smooth muscle cell
1
mammary gland epithelial cell
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
natural killer cell
1
neuron cell of Hypothalamus (neuron)
1
neuronal stem cell
1
renal cell carcinoma
1
skin fibroblast
1
stem cell
Organ
2
embryo
Life stage
2
embryonic
Date released
2
September, 2022
Software used
1
chromhmm
1
r
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
month_released!
February, 2021
annotation_type!
target gene predictions
Showing 2 of 2 results
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Download
FileSet
DSR289IIV
released
Annotation file set
: Candidate regulatory elements for BSS00169 cardiac mesoderm primordium from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR372DTL
released
Annotation file set
: Chromatin states for BSS00169 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP