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Schema
Citing CMDGA
Clear Filters
Annotation type
2
binding sites
1
histone modifications
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
2
in vitro differentiated cells
Biosample term
91
monocyte
42
CD8-positive, alpha-beta T cell
41
common myeloid progenitor, CD34-positive
27
CD14-positive monocyte
24
B cell
23
CD4-positive, alpha-beta memory T cell
15
CD8-positive, alpha-beta memory T cell
15
endothelial cell
15
foreskin keratinocyte
14
foreskin fibroblast
14
mononuclear cell
13
endothelial cell of umbilical vein
13
fibroblast of lung
13
keratinocyte
13
trophoblast cell
12
mammary epithelial cell
12
natural killer cell
11
CD4-positive, alpha-beta T cell
11
fibroblast
11
hepatocyte
11
pericyte cell
11
regulatory T cell
10
T cell
10
neurosphere
10
skeletal muscle myoblast
10
smooth muscle cell
9
T-helper 1 cell
9
bronchial epithelial cell
9
fibroblast of dermis
9
mammary gland epithelial cell
9
neutrophil
9
osteoblast
8
T-helper 17 cell
8
T-helper 2 cell
8
dermis blood vessel endothelial cell
8
naive thymus-derived CD4-positive, alpha-beta T cell
7
astrocyte
7
epithelial cell of prostate
7
fibroblast of cardiac tissue
7
macrophage
7
pancreatic ductal cell
6
T-cell
6
cardiac muscle cell
6
endothelial cell of hepatic sinusoid
6
fibroblast of breast
6
fibroblast of mammary gland
6
fibroblast of pulmonary artery
6
fibroblast of villous mesenchyme
6
myoepithelial cell of mammary gland
6
naive T cell
6
olfactory receptor cell
6
peripheral blood mononuclear cell
6
retinal pigment epithelial cell
5
CD1c-positive myeloid dendritic cell
5
choroid plexus epithelial cell
5
epithelial cell of esophagus
5
epithelial cell of proximal tubule
5
foreskin melanocyte
5
kidney tubule cell
5
pancreatic delta cell
5
pulmonary artery endothelial cell
5
skin fibroblast
4
CD4-positive helper T cell
4
astrocyte of the cerebellum
4
astrocyte of the hippocampus
4
cardiac fibroblast
4
dermis lymphatic vessel endothelial cell
4
erythroblast
4
fibroblast of the aortic adventitia
4
glomerular endothelial cell
4
kidney epithelial cell
4
luminal epithelial cell of mammary gland
4
lung microvascular endothelial cell
4
mast cell
4
myofibroblast cell
4
pancreatic acinar cell
4
pancreatic alpha cell
4
pancreatic beta cell
4
renal cortical epithelial cell
4
skeletal muscle cell
4
skeletal muscle satellite cell
4
smooth muscle cell of the brain vasculature
4
tracheal epithelial cell
3
aortic adventitial fibroblast
3
astrocyte of the spinal cord
3
basal cell
3
brain microvascular endothelial cell
3
colon epithelial cell
3
cortical cell of adrenal gland
3
enterocyte
3
fibroblast of gingiva
3
fibroblast of peridontal ligament
3
fibroblast of the conjunctiva
3
glomerular visceral epithelial cell
3
hepatic stellate cell
3
iris pigment epithelial cell
3
kidney glomerular epithelial cell
3
mesenchymal stem cell
3
mononuclear cell of bone marrow
3
myotube
3
non-pigmented ciliary epithelial cell
3
pancreatic A cell
3
plasma cell
3
pre-B acute lymphoblastic leukemia cell
3
preadipocyte
3
renal epithelial cell
3
stromal cell of bone marrow
3
type B pancreatic cell
3
type I muscle cell
3
type II muscle cell
3
type II pneumocyte
2
cardiac fibroblast
2
Adipose stromal cell
2
CD34-positive, CD38-negative hematopoietic stem cell
2
Ishikawa
2
Rhabdoid Tumor of the Kidney
2
Schwann cell
2
Th1 cell
2
Th17 cell
2
activated CD4-positive, alpha-beta T cell
2
acute myeloid leukemia cell
2
amnion mesenchymal stem cell
2
amniotic stem cell
2
aortic endothelial cell
2
blood vessel smooth muscle cell
2
brain pericyte
2
cardiac muscle myoblast
2
chronic lymphocytic leukemia cell
2
columnar chondrocyte
2
dermis microvascular lymphatic vessel endothelial cell
2
enteric smooth muscle cell
2
epidermal melanocyte
2
epithelial cell of amnion
2
erythroid cell
2
erythroid progenitor cell
2
gabaergic neuron
2
glutamatergic neuron
2
goblet cell
2
head and neck squamous cell carcinoma
2
kidney capillary endothelial cell
2
leukemic stem cell
2
mammary stem cell
2
mantle cell lymphoma cell
2
mature neutrophil
2
megakaryocyte
2
memory B cell
2
meso-epithelial cell
2
mesothelial cell
2
naive B cell
2
naive t cell
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
neoplastic cell
2
neuronal stem cell
2
pancreatic endocrine cell
2
pancreatic polypeptide-secreting cell
2
parietal cell
2
peptic cell
2
peripheral blood stem cell
2
peripheral blood-derived erythroblast
2
prostate gland cancer cell
2
pulmonary interstitial fibroblast
2
regular cardiac myocyte
2
renal proximal tubule cell
2
skeletal muscle fiber
2
small cell ovarian carcinoma cell
2
smooth muscle cell of the coronary artery
2
smooth muscle cell of the esophagus
2
somatic muscle myotube
2
thyroid follicular cell
2
vascular associated smooth muscle cell
1
brain microvascular endothelial cell
1
retinal pigment epithelial cell
1
B cell, CD19-positive
1
B-cell lymphoma cell
1
B-lymphocyte
1
CD34-PB
1
CD34-positive, CD38-positive common myeloid progenitor OR CD34-positive, CD38-positive common lymphoid progenitor
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
CD56-positive, CD161-positive immature natural killer cell
1
Heart fetal (cardiac muscle cell)
1
Liver fetal (hepatocyte)
1
Satellite Cells, Skeletal Muscle
1
Stromal Predominant Kidney Wilms Tumor
1
T-cell lymphoma cell
1
Th2 cell
1
activated CD8-positive, alpha-beta T cell
1
acute myeloid leukemia
1
adipocyte
1
adult endothelial progenitor cell
1
alternatively activated macrophage
1
alveolar cell type II
1
alveolar macrophage
1
amniotic epithelial cell
1
aortic smooth muscle cell
1
basal cell of epidermis
1
bone cell
1
bone marrow cell
1
bronchial goblet cell
1
cardiac endothelial cell
1
cell
Organ
3
musculature of body
Date released
2
February, 2021
1
October, 2022
Software used
2
macs
1
chromhmm
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
annotation_type!
accessible chromatin
Showing 3 of 3 results
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Download
FileSet
DSR198EWK
released
Annotation file set
: Binding sites annotation for myotube (HSMMtube) for GOLDENPATH ENCODE DCC
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR745RPS
released
Annotation file set
: Histone modifications annotation for Muscle Myotube from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR122YGR
released
Annotation file set
: Binding sites annotation for Muscle Myotube from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP