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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
snATAC-seq
Available data
2
bed bed3+
2
bigWig
File set status
2
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
100
monocyte
22
fibroblast
19
macrophage
18
endothelial cell
18
pericyte cell
16
endothelial cell of hepatic sinusoid
16
hepatocyte
13
smooth muscle cell
12
excitatory neuron
10
astrocyte
7
T cell
6
colon epithelial cell
6
olfactory receptor cell
5
cortical cell of adrenal gland
5
erythroblast
5
inhibitory neuron
5
pancreatic acinar cell
5
type II pneumocyte
4
blood vessel smooth muscle cell
4
enteric smooth muscle cell
4
gabaergic neuron
4
glutamatergic neuron
4
keratinocyte
4
luminal epithelial cell of mammary gland
4
pancreatic beta cell
4
pancreatic ductal cell
4
skeletal muscle satellite cell
4
smooth muscle cell of the esophagus
3
cardiac fibroblast
3
B cell
3
CD4-positive helper T cell
3
blood cell
3
endocardial cell
3
endothelial cell of lymphatic vessel
3
enteric neuron
3
enterocyte
3
fibroblast of cardiac tissue
3
mesothelial cell
3
microglial cell
3
oligodendrocyte precursor cell
3
osteoblast
3
pancreatic alpha cell
3
schwann cell
3
skeletal muscle fiber
3
type I pneumocyte
2
CD4-positive, alpha-beta T cell
2
CD8-positive, alpha-beta T cell
2
Muller cell
2
alveolar macrophage
2
basal cell
2
basal cell of epidermis
2
cardiac endothelial cell
2
ciliated cell
2
club cell
2
colon goblet cell
2
eccrine cell
2
enterochromaffin-like cell
2
enterocyte of epithelium of small intestine
2
fat cell
2
fetal cardiomyocyte
2
foveolar cell of stomach
2
granular cell of epidermis
2
hepatic stellate cell
2
intestinal tuft cell
2
luteal cell
2
mammary gland epithelial cell
2
mast cell
2
mature NK T cell
2
melanocyte
2
memory B cell
2
mesangial cell
2
myoepithelial cell
2
naive t cell
2
non keratinizing barrier epithelial cell
2
oligodendrocyte
2
pancreatic A cell
2
pancreatic delta cell
2
paneth cell
2
parietal cell
2
peptic cell
2
plasma cell
2
regular atrial cardiac myocyte
2
regulatory T cell
2
respiratory goblet cell
2
retinal pigment epithelial cell
2
skeletal muscle fibroblast
2
skin fibroblast
2
small intestine goblet cell
2
stomach neuroendocrine cell
2
stromal cell
2
thyroid follicular cell
2
type B pancreatic cell
2
type I cell of adrenal cortex
2
type I muscle cell
2
type II cell of adrenal cortex
2
type II muscle cell
2
uterine smooth muscle cell
2
ventricular cardiac muscle cell
1
Leydig cell
1
T follicular helper cell
1
T-helper 1 cell
1
T-helper 17 cell
1
T-helper 2 cell
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
adipocyte
1
aortic endothelial cell
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain microvascular endothelial cell
1
brain pericyte
1
cardiac muscle cell
1
cholangiocyte
1
choroid plexus epithelial cell
1
chromaffin cell of adrenal gland
1
ciliated epithelial cell
1
endothelial cell of umbilical vein
1
enteroendocrine cell
1
epithelial cell of proximal tubule
1
extravillous trophoblast
1
fetal thymocyte
1
fibroblast of the aortic adventitia
1
gastric goblet cell
1
glial cell
1
glomerular endothelial cell
1
goblet cell
1
helper T cell
1
hepatoblast
1
islet of Langerhans
1
kidney capillary endothelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
kidney tubule cell
1
lung neuroendocrine cell
1
megakaryocyte
1
metanephros
1
naive B cel
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
naive thymus-derived CD8-positive, alpha-beta T cell
1
natural killer cell
1
neuron
1
neutrophil
1
parietal epithelial cell
1
peripheral neuron
1
photoreceptor cell
1
placental hematopoietic stem cell
1
placental villus capillary endothelial cell
1
renal cortical epithelial cell
1
retinal bipolar neuron
1
sensory neuron
1
skeletal muscle cell
1
smooth muscle cell of the brain vasculature
1
smooth muscle cell of the coronary artery
1
sympathetic neuron
1
trophoblast giant cell
1
ureteric bud
Date released
2
November, 2021
Software used
2
macs
Lab
2
Bing Ren, UCSD
Project
2
ENCODE
RFA
2
ENCODE3
annotation_type!
chromatin state
Showing 2 of 2 results
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Download
FileSet
DSR269MUO
released
Annotation file set
: Accessible chromatin annotation of Fetal Ventricular Cardiomyocyte from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR550PNN
released
Annotation file set
: Accessible chromatin annotation of Fetal Atrial Cardiomyocyte from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE