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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
binding sites
1
accessible chromatin
1
histone modifications
Annotation Category
4
cis-regulatory elements
Annotation type Category
3
ChIP-seq
1
DNase-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
48
CD8-positive, alpha-beta T cell
41
common myeloid progenitor, CD34-positive
30
monocyte
29
B cell
27
CD14-positive monocyte
23
CD4-positive, alpha-beta memory T cell
23
regulatory T cell
21
endothelial cell
21
epithelial cell of proximal tubule
19
T-helper 1 cell
19
glomerular endothelial cell
17
T-helper 17 cell
17
natural killer cell
16
hepatocyte
15
CD8-positive, alpha-beta memory T cell
15
endothelial cell of umbilical vein
15
foreskin fibroblast
15
foreskin keratinocyte
15
pancreatic ductal cell
14
mononuclear cell
14
pancreatic alpha cell
14
pancreatic beta cell
14
pancreatic delta cell
14
skeletal muscle myoblast
14
trophoblast cell
13
CD4-positive, alpha-beta T cell
13
T-helper 2 cell
13
fibroblast of lung
13
mammary epithelial cell
13
naive thymus-derived CD4-positive, alpha-beta T cell
13
osteoblast
12
neutrophil
11
T cell
11
keratinocyte
11
pancreatic acinar cell
10
bronchial epithelial cell
10
glomerular visceral epithelial cell
10
neurosphere
9
fibroblast of dermis
9
macrophage
9
mature neutrophil
8
dermis blood vessel endothelial cell
8
mammary gland epithelial cell
8
naive thymus-derived CD8-positive, alpha-beta T cell
8
pancreatic stellate cell
7
epithelial cell of prostate
7
fibroblast
7
fibroblast of mammary gland
7
fibroblast of pulmonary artery
7
fibroblast of villous mesenchyme
7
kidney interstitial cell
7
kidney loop of Henle thin ascending limb epithelial cell
7
kidney tubule cell
7
memory B cell
7
retinal pigment epithelial cell
7
skeletal muscle satellite cell
7
smooth muscle cell
6
CD1c-positive myeloid dendritic cell
6
T-cell
6
alternatively activated macrophage
6
astrocyte
6
cardiac muscle cell
6
erythroblast
6
fibroblast of breast
6
fibroblast of cardiac tissue
6
gamma-delta T cell
hepatic stellate cell
6
kidney glomerular epithelial cell
6
mesenchymal stem cell
6
myoepithelial cell of mammary gland
6
naive B cell
6
naive T cell
6
pancreatic polypeptide-secreting cell
6
peripheral blood mononuclear cell
6
pulmonary artery endothelial cell
6
renal cortical epithelial cell
6
skeletal muscle fiber
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
B Cell
5
CD14-positive, CD16-negative classical monocyte
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Fibroblast
5
Glomerular Capillary Endothelial Cell
5
Intercalated Cell Type A
5
Intercalated Cell Type B
5
Lymphatic Endothelial Cell
5
M2 Macrophage
5
Medullary Thick Ascending Limb Cell
5
Mesangial Cell
5
Monocyte
5
Monocyte-derived Cell
5
Myofibroblast
5
Natural Killer T Cell
5
Natural Killer T Cell Type 1
5
Natural Killer T Cell Type 2
5
Non-Classical Monocyte
5
Parietal Epithelial Cell
5
Peritubular Capillary Endothelial Cell
5
Plasma Cell
5
Plasmacytoid Dendritic Cell
5
Podocyte
5
Principal Cell
5
Proximal Tubule Epithelial Cell Segment 1 and 2
5
Proximal Tubule Epithelial Cell Segment 3
5
Regulatory T Cell
5
Renin-positive Juxtaglomerular Granular Cell
5
T Cell
5
Transitional Principal-Intercalated Cell
5
Vascular Smooth Muscle Cell / Pericyte
5
central memory CD8-positive, alpha-beta T cell
5
choroid plexus epithelial cell
5
effector memory CD8-positive, alpha-beta T cell
5
epithelial cell of esophagus
5
foreskin melanocyte
5
inflammatory macrophage
5
kidney cortex collecting duct principal cell
5
kidney distal convoluted tubule epithelial cell
5
kidney epithelial cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
mesangial cell
5
myofibroblast cell
5
pancreatic endothelial cell
5
skin fibroblast
5
tracheal epithelial cell
5
type I muscle cell
5
type II muscle cell
4
T follicular helper cell
4
acute myeloid leukemia cell
4
adult endothelial progenitor cell
4
aortic adventitial fibroblast
4
astrocyte of the cerebellum
4
astrocyte of the hippocampus
4
cardiac fibroblast
4
dermis lymphatic vessel endothelial cell
4
effector CD4-positive, alpha-beta T cell
4
effector T cell
4
fibroblast of peridontal ligament
4
glutamatergic neuron
4
iris pigment epithelial cell
4
kidney connecting tubule epithelial cell
4
leukocyte
4
lung microvascular endothelial cell
4
mast cell
4
mature natural killer cell
4
memory T cell
4
memory regulatory T cell
4
nephron progenitor
4
non-pigmented ciliary epithelial cell
4
pancreatic MUC5B+ductal cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic gamma+epsilon cell
4
pancreatic macrophage cell
4
pancreatic mast cell
4
plasma cell
4
preadipocyte
4
renal epithelial cell
4
skeletal muscle cell
4
smooth muscle cell of the brain vasculature
4
vascular associated smooth muscle cell
3
Cycling Mononuclear Phagocyte
3
Ishikawa
3
Mast Cell
3
S-shaped body
3
Schwann cell
3
Th1 cell
3
Th17 cell
3
activated CD4-positive, alpha-beta T cell
3
adipocyte
3
aortic endothelial cell
3
astrocyte of the spinal cord
3
basal cell
3
bone marrow cell
3
brain microvascular endothelial cell
3
enterocyte
3
erythroid cell
Date released
2
February, 2021
1
June, 2020
1
October, 2022
Software used
3
macs
1
chromhmm
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
assembly!
GRCh38
biosample_term_name!
hepatic stellate cell
Showing 4 of 4 results
table-tab-icon
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Download
FileSet
DSR456JYN
released
Annotation file set
: Binding sites annotation for aortic adventitial fibroblast (AoAF) for GOLDENPATH ENCODE DCC
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR153XVQ
released
Annotation file set
: Histone modifications annotation for Cardiovascular AoAF from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR164FXU
released
Annotation file set
: Binding sites annotation for Cardiovascular AoAF from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR478PXP
released
Annotation file set
: Accessible chromatin annotation for Cardiovascular AoAF from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP