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Schema
Citing CMDGA
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Annotation type
1
accessible chromatin
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
ATAC-seq
Available data
1
bed bed3+
1
bigWig
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
21
endothelial cell
21
epithelial cell of proximal tubule
19
glomerular endothelial cell
16
hepatocyte
15
endothelial cell of umbilical vein
15
foreskin keratinocyte
15
pancreatic ductal cell
14
pancreatic alpha cell
14
pancreatic beta cell
14
pancreatic delta cell
11
keratinocyte
11
pancreatic acinar cell
10
bronchial epithelial cell
10
glomerular visceral epithelial cell
10
mammary epithelial cell
8
dermis blood vessel endothelial cell
8
mammary gland epithelial cell
7
epithelial cell of prostate
7
kidney loop of Henle thin ascending limb epithelial cell
7
kidney tubule cell
7
retinal pigment epithelial cell
6
kidney glomerular epithelial cell
6
myoepithelial cell of mammary gland
6
pancreatic polypeptide-secreting cell
6
pulmonary artery endothelial cell
6
renal cortical epithelial cell
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
Connecting Tubule Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Glomerular Capillary Endothelial Cell
5
Intercalated Cell Type A
5
Intercalated Cell Type B
5
Lymphatic Endothelial Cell
5
Medullary Thick Ascending Limb Cell
5
Parietal Epithelial Cell
5
Peritubular Capillary Endothelial Cell
5
Podocyte
5
Principal Cell
5
Proximal Tubule Epithelial Cell Segment 1 and 2
5
Proximal Tubule Epithelial Cell Segment 3
5
Transitional Principal-Intercalated Cell
5
choroid plexus epithelial cell
5
epithelial cell of esophagus
5
kidney cortex collecting duct principal cell
5
kidney distal convoluted tubule epithelial cell
5
kidney epithelial cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
pancreatic endothelial cell
5
tracheal epithelial cell
4
dermis lymphatic vessel endothelial cell
4
iris pigment epithelial cell
4
kidney connecting tubule epithelial cell
4
lung microvascular endothelial cell
4
non-pigmented ciliary epithelial cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic gamma+epsilon cell
3
S-shaped body
3
aortic endothelial cell
3
brain microvascular endothelial cell
3
enterocyte
3
kidney capillary endothelial cell
3
kidney collecting duct intercalated cell
3
kidney cortex collecting duct intercalated cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
meso-epithelial cell
2
capillary endothelial cell
2
dermis microvascular lymphatic vessel endothelial cell
2
endothelial cell of coronary artery
2
epidermal melanocyte
2
epithelial cell of amnion
2
goblet cell
2
kidney inner medulla collecting duct intercalated cell
2
luminal epithelial cell of mammary gland
2
renal principal cell
2
renal vesicle
2
type II pneumocyte
1
brain microvascular endothelial cell
1
retinal pigment epithelial cell
1
Liver fetal (hepatocyte)
1
amniotic epithelial cell
1
bronchial goblet cell
1
cholangiocyte
1
club cell
1
cortical cell of adrenal gland
1
endothelial cell of lymphatic vessel
1
epithelial cell of distal tubule
1
granulosa cell
1
intestinal epithelial cell
1
kidney loop of Henle ascending limb epithelial cell
1
kidney loop of Henle epithelial cell
1
kidney loop of Henle thin descending limb epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
luminal epithelial cell of prostatic duct
1
mesothelial cell
1
neuroendocrine cell
1
pancreatic A cell
1
parietal cell
1
peptic cell
1
proximal tubule
1
renal alpha-intercalated cell
1
renal beta-intercalated cell
1
renal connecting tubule
1
renal intercalated cell
1
thyroid follicular cell
1
type B pancreatic cell
1
type I pneumocyte
1
ureteric bud
Organ
1
epithelium
1
kidney
Life stage
1
adult
Date released
1
August, 2021
Software used
1
macs
Lab
1
Katalin Susztak, Upenn
Project
1
AMP
RFA
1
AMP2
assembly!
GRCh38
Showing 1 of 1 results
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Download
FileSet
DSR366JKU
released
Annotation file set
: Accessible chromatin from Katalin Susztak 75kidney Project of PT-S1
Lab:
Katalin Susztak, Upenn
Project:
AMP