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Citing CMDGA
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Annotation type
1
accessible chromatin
Annotation Category
1
cis-regulatory elements
Annotation type Category
7
snATAC-seq
6
scRNA-seq
3
ChIP-seq
3
RNA-seq
1
ATAC-seq
1
snRNA-seq
Available data
1
bed bed3+
1
bigWig
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
15
CD14-positive monocyte
15
monocyte
6
hepatocyte
4
CD8-positive, alpha-beta T cell
4
endothelial cell of hepatic sinusoid
4
glutamatergic neuron
3
B cell
3
osteoblast
2
CD4-positive helper T cell
2
T follicular helper cell
2
T-cell
2
T-helper 1 cell
2
T-helper 17 cell
2
T-helper 2 cell
2
aortic endothelial cell
2
astrocyte
2
central memory CD8-positive, alpha-beta T cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
gamma-delta T cell
2
mature natural killer cell
2
memory B cell
2
memory T cell
2
memory regulatory T cell
2
naive B cell
2
naive regulatory T cell
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
natural killer cell
2
pancreatic acinar cell
2
pancreatic beta cell
2
pancreatic ductal cell
2
regulatory T cell
1
B cell, CD19-positive
1
CD56-positive, CD161-positive immature natural killer cell
1
Heart fetal (cardiac muscle cell)
1
Liver fetal (hepatocyte)
1
cardiac muscle cell
1
common myeloid progenitor, CD34-positive
1
endothelial cell
1
endothelial cell of umbilical vein
1
epithelial cell of prostate
1
erythroblast
1
fibroblast of arm
1
fibroblast of dermis
1
fibroblast of lung
1
foreskin fibroblast
1
gabaergic neuron
1
glomerular visceral epithelial cell
1
immature natural killer cell
1
keratinocyte
1
kidney glomerular epithelial cell
1
kidney interstitial cell
1
kidney loop of Henle epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
mammary epithelial cell
1
megakaryocyte-erythroid progenitor cell
1
microglial cell/astrocyte
1
myeloid dendritic cell
1
neuron
1
non-neuronal cell
1
oligodendrocyte
1
pancreatic A cell
1
pancreatic alpha cell
1
plasma cell
1
plasmacytoid dendritic cell
1
preadipocyte
1
renal intercalated cell
1
renal principal cell
1
smooth muscle cell of the coronary artery
1
trophoblast cell
1
type B pancreatic cell
Organ
1
epithelium
Life stage
1
adult
Date released
1
August, 2021
Software used
1
macs
Lab
1
Katalin Susztak, Upenn
Project
6
ENCODE
1
AMP
RFA
1
AMP2
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Download
FileSet
DSR493PXL
released
Annotation file set
: Accessible chromatin from Katalin Susztak 75kidney Project of Endothelial cells
Lab:
Katalin Susztak, Upenn
Project:
AMP