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Schema
Citing CMDGA
Clear Filters
Annotation type
5
target gene predictions
3
candidate regulatory elements
3
chromatin state
2
accessible chromatin
2
histone modifications
1
binding sites
1
variant allelic effects
Annotation Category
5
Target gene links
2
cis-regulatory elements
Annotation type Category
4
ChIP-seq
3
ATAC-seq
3
DNase-seq
1
H3K27ac ChIP-Seq
Available data
7
bed bed3+
File set status
7
released
Genome assembly (visualization)
7
hg19
2
GRCh38
Organism
7
Homo sapiens
Biosample type
7
primary cell
1
cell line
Biosample term
88
monocyte
35
CD8-positive, alpha-beta T cell
19
CD14-positive monocyte
14
common myeloid progenitor, CD34-positive
10
B cell
10
pericyte cell
9
CD4-positive, alpha-beta memory T cell
8
endothelial cell
7
CD8-positive, alpha-beta memory T cell
7
hepatocyte
7
keratinocyte
6
mononuclear cell
6
natural killer cell
6
olfactory receptor cell
6
smooth muscle cell
6
trophoblast cell
5
astrocyte
5
pancreatic ductal cell
5
regulatory T cell
4
T cell
4
endothelial cell of umbilical vein
4
fibroblast
4
fibroblast of cardiac tissue
4
fibroblast of dermis
4
fibroblast of lung
4
foreskin fibroblast
4
foreskin keratinocyte
4
mammary epithelial cell
4
mammary gland epithelial cell
4
osteoblast
4
pancreatic delta cell
3
CD4-positive, alpha-beta T cell
3
T-helper 1 cell
3
T-helper 17 cell
3
T-helper 2 cell
3
bronchial epithelial cell
3
colon epithelial cell
3
epithelial cell of prostate
3
luminal epithelial cell of mammary gland
3
macrophage
3
naive T cell
3
neurosphere
3
neutrophil
3
pancreatic A cell
3
pancreatic acinar cell
3
pancreatic alpha cell
3
pancreatic beta cell
3
skeletal muscle myoblast
3
skin fibroblast
3
type B pancreatic cell
2
CD1c-positive myeloid dendritic cell
2
CD4-positive helper T cell
2
T-cell
2
activated CD4-positive, alpha-beta T cell
2
acute myeloid leukemia cell
2
blood vessel smooth muscle cell
2
cortical cell of adrenal gland
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
enteric smooth muscle cell
2
erythroblast
2
fibroblast of breast
2
fibroblast of mammary gland
2
fibroblast of pulmonary artery
2
fibroblast of villous mesenchyme
2
gabaergic neuron
2
glutamatergic neuron
2
hepatic stellate cell
2
kidney tubule cell
2
mantle cell lymphoma cell
2
mast cell
2
megakaryocyte
2
memory B cell
2
myoepithelial cell of mammary gland
2
naive B cell
2
naive thymus-derived CD4-positive, alpha-beta T cell
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
plasma cell
2
pre-B acute lymphoblastic leukemia cell
2
preadipocyte
2
pulmonary artery endothelial cell
2
retinal pigment epithelial cell
2
skeletal muscle satellite cell
2
smooth muscle cell of the esophagus
2
tracheal epithelial cell
2
type II pneumocyte
1
Adipose stromal cell
1
B cell, CD19-positive
1
B-cell lymphoma cell
1
B-lymphocyte
1
CD34-positive, CD38-negative hematopoietic stem cell
1
CD34-positive, CD38-positive common myeloid progenitor OR CD34-positive, CD38-positive common lymphoid progenitor
1
CD56-positive, CD161-positive immature natural killer cell
1
Ishikawa
1
Rhabdoid Tumor of the Kidney
1
Stromal Predominant Kidney Wilms Tumor
1
T-cell lymphoma cell
1
Th1 cell
1
Th17 cell
1
activated CD8-positive, alpha-beta T cell
1
acute myeloid leukemia
1
adult endothelial progenitor cell
1
alternatively activated macrophage
1
alveolar cell type II
1
alveolar macrophage
1
amnion mesenchymal stem cell
1
amniotic stem cell
1
aortic adventitial fibroblast
1
aortic endothelial cell
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
astrocyte of the spinal cord
1
basal cell
1
basal cell of epidermis
1
bone cell
1
bone marrow cell
1
brain microvascular endothelial cell
1
cardiac endothelial cell
1
cardiac muscle cell
1
cardiac muscle myoblast
1
cell
1
choroid plexus epithelial cell
1
chronic lymphocytic leukemia cell
1
ciliated cell
1
club cell
1
colon goblet cell
1
columnar chondrocyte
1
conventional dendritic cell
1
eccrine cell
1
endocardial cell
1
endothelial cell of lymphatic vessel
1
enteric neuron
1
enterochromaffin-like cell
1
enterocyte of epithelium of small intestine
1
epidermal melanocyte
1
epithelial cell of amnion
1
epithelial cell of esophagus
1
epithelial cell of proximal tubule
1
erythroid cell
1
erythroid progenitor cell
1
fat cell
1
fibroblast of arm
1
fibroblast of gingiva
1
fibroblast of peridontal ligament
1
fibroblast of the aortic adventitia
1
fibroblast of the conjunctiva
1
foreskin melanocyte
1
foveolar cell of stomach
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
granular cell of epidermis
1
granulocyte
1
head and neck neoplasia
1
head and neck squamous cell carcinoma
1
inflammatory macrophage
1
intestinal epithelial cell
1
intestinal tuft cell
1
iris pigment epithelial cell
1
kidney capillary endothelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
leukemic stem cell
1
lung microvascular endothelial cell
1
luteal cell
1
mammary stem cell
1
mature NK T cell
1
mature neutrophil
1
megakaryocyte-erythroid progenitor cell
1
melanocyte
1
meningioma cell
1
meso-epithelial cell
1
mesothelial cell
1
microglial cell
1
mononuclear cell of bone marrow
1
mycosis fungoides
1
myeloid leukocyte
1
myoepithelial cell
1
myotube
1
naive t cell
1
natural killer cell mediated cytotoxicity
1
neoplastic cell
1
neural progenitor cell
1
neuronal stem cell
1
neutrophil progenitor cell
1
non keratinizing barrier epithelial cell
1
non-classical monocyte
1
non-pigmented ciliary epithelial cell
1
oligodendrocyte
1
oligodendrocyte precursor cell
1
pancreatic endocrine cell
1
pancreatic polypeptide-secreting cell
1
pancreatic stellate cell
1
paneth cell
1
parietal cell
1
peptic cell
1
peripheral blood
1
peripheral blood mononuclear cell
1
peripheral blood stem cell
1
plasmacytoid dendritic cell
1
prostate gland cancer cell
Organ
7
epithelium
7
skin of body
Life stage
2
unknown
Date released
2
February, 2021
2
November, 2021
2
September, 2022
1
May, 2021
Software used
3
abc
2
macs
2
r
Lab
4
AMP-T2D consortium
2
Bing Ren, UCSD
1
Jesse Engreitz, Stanford University
Project
5
AMP
2
ENCODE
RFA
5
AMP
2
ENCODE3
Showing 7 of 7 results
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Download
FileSet
DSR125EUW
released
Annotation file set
: Target gene predictions for BSS01071 keratinocyte from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR555IYR
released
Annotation file set
: Target gene predictions for BSS01068 keratinocyte from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR681TKD
released
Annotation file set
: Target gene predictions of Keratinocyte 2 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR385FIQ
released
Annotation file set
: Target gene predictions of Keratinocyte 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR799BPM
released
Annotation file set
: Histone modifications annotation for Epidermis Keratinocyte_progenitors from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR855ZQV
released
Annotation file set
: Histone modifications annotation for Epidermis Dombi23 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR926EGV
released
Annotation file set
: enhancer-gene predicton of keratinocyte-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP